RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 LILRA6Q6PI73 481 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 LIPIQ6XZB0 460 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 PLEKHG7Q6ZR37 379 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 VN1R2Q8NFZ6 395 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 STARD8Q92502 1023 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 IL17FQ96PD4 163 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 RNF208Q9H0X6 261 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 ZBP1Q9H171 429 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 OR2AG1Q9H205 316 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 TMEM165Q9HC07 324 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 PLAGL1Q9UM63 463 aa11.46□□□□□ -0.57
CPNE8-203ENST00000538596 ALPK3Q96L96 1907 aa11.46□□□□□ -0.58
CPNE8-203ENST00000538596 CXCL14O95715 111 aa11.46□□□□□ -0.58
CPNE8-203ENST00000538596 FURINP09958 794 aa11.46□□□□□ -0.58
CPNE8-203ENST00000538596 PPIBP23284 216 aaKnown RBP11.46□□□□□ -0.58
CPNE8-203ENST00000538596 ITGB8P26012 769 aa11.46□□□□□ -0.58
CPNE8-203ENST00000538596 GRK3P35626 688 aa11.46□□□□□ -0.58
CPNE8-203ENST00000538596 CHI3L1P36222 383 aaPredicted RBP11.46□□□□□ -0.58
CPNE8-203ENST00000538596 RPS3AP61247 264 aaKnown RBP11.46□□□□□ -0.58
CPNE8-203ENST00000538596 NTHL1P78549 312 aa11.46□□□□□ -0.58
CPNE8-203ENST00000538596 ZNF33BQ06732 778 aa11.46□□□□□ -0.58
CPNE8-203ENST00000538596 ST3GAL4Q11206 333 aa11.46□□□□□ -0.58
CPNE8-203ENST00000538596 TP53BP2Q13625 1128 aa11.46□□□□□ -0.58
CPNE8-203ENST00000538596 SLC39A5Q6ZMH5 540 aa11.46□□□□□ -0.58
CPNE8-203ENST00000538596 TRAPPC5Q8IUR0 188 aa11.46□□□□□ -0.58
CPNE8-203ENST00000538596 ZNF675Q8TD23 568 aa11.46□□□□□ -0.58
CPNE8-203ENST00000538596 C16orf78Q8WTQ4 265 aa11.46□□□□□ -0.58
CPNE8-203ENST00000538596 HTRA1Q92743 480 aa11.46□□□□□ -0.58
CPNE8-203ENST00000538596 HPS1Q92902 700 aa11.46□□□□□ -0.58
CPNE8-203ENST00000538596 FOPNLQ96NB1 174 aa11.46□□□□□ -0.58
CPNE8-203ENST00000538596 CENPOQ9BU64 300 aa11.46□□□□□ -0.58
CPNE8-203ENST00000538596 ACAT2Q9BWD1 397 aa11.46□□□□□ -0.58
CPNE8-203ENST00000538596 C1GALT1Q9NS00 363 aa11.46□□□□□ -0.58
CPNE8-203ENST00000538596 ATAD3AQ9NVI7 634 aa11.46□□□□□ -0.58
CPNE8-203ENST00000538596 SCHIP1Q9P0W5 487 aaPredicted RBP11.46□□□□□ -0.58
CPNE8-203ENST00000538596 IL36AQ9UHA7 158 aa11.46□□□□□ -0.58
CPNE8-203ENST00000538596 RAB23Q9ULC3 237 aa11.46□□□□□ -0.58
CPNE8-203ENST00000538596 PAIP2BQ9ULR5 123 aaKnown RBP11.46□□□□□ -0.58
CPNE8-203ENST00000538596 CORO2BQ9UQ03 480 aa11.46□□□□□ -0.58
CPNE8-203ENST00000538596 PRKAB1Q9Y478 270 aa11.46□□□□□ -0.58
CPNE8-203ENST00000538596 XIRP2A4UGR9 3374 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 NOTCH4Q99466 2003 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 PIPSLA2A3N6 862 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 DSCR3O14972 297 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 DNTTP04053 509 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 ADORA3P0DMS8 318 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 ACRP10323 421 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 CTSKP43235 329 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 CDK6Q00534 326 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 MESP2Q0VG99 397 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 ZNF404Q494X3 552 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 PARS2Q7L3T8 475 aaKnown RBP11.45□□□□□ -0.58
CPNE8-203ENST00000538596 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.45□□□□□ -0.58
CPNE8-203ENST00000538596 ST13P5Q8NFI4 369 aaPredicted RBP11.45□□□□□ -0.58
CPNE8-203ENST00000538596 PPCDCQ96CD2 204 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 ZSWIM3Q96MP5 696 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 YME1L1Q96TA2 773 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 SPATA9Q9BWV2 254 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 BHLHE41Q9C0J9 482 aaPredicted RBP11.45□□□□□ -0.58
CPNE8-203ENST00000538596 DMRT3Q9NQL9 472 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 MS4A12Q9NXJ0 267 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 QPCTLQ9NXS2 382 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 ATP6V1HQ9UI12 483 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 ATP11BQ9Y2G3 1177 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 SNX8Q9Y5X2 465 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 TMEM221A6NGB7 291 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 KPNA3O00505 521 aaPredicted RBP11.45□□□□□ -0.58
CPNE8-203ENST00000538596 TBX1O43435 398 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 DPM1O60762 260 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 MOSPD3O75425 235 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 PCSK2P16519 638 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 GABRB1P18505 474 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 MMP12P39900 470 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 EIF2DP41214 584 aaKnown RBP11.45□□□□□ -0.58
CPNE8-203ENST00000538596 TBCEQ15813 527 aaPredicted RBP11.45□□□□□ -0.58
CPNE8-203ENST00000538596 DUSP7Q16829 419 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 RPS26P11Q5JNZ5 115 aaPredicted RBP11.45□□□□□ -0.58
CPNE8-203ENST00000538596 ANKRD33Q7Z3H0 272 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 ZNF605Q86T29 641 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 CACTIN-AS1Q8N1I8 211 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 CLIP4Q8N3C7 705 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 STX19Q8N4C7 294 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 FAM83FQ8NEG4 500 aaPredicted RBP11.45□□□□□ -0.58
CPNE8-203ENST00000538596 OR52N2Q8NGI0 321 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 TIFAQ96CG3 184 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 Q96MT0 163 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 FAM129BQ96TA1 746 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 CHCHD6Q9BRQ6 235 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.45□□□□□ -0.58
CPNE8-203ENST00000538596 ACER3Q9NUN7 267 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 TDP1Q9NUW8 608 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 ZNF229Q9UJW7 825 aa11.45□□□□□ -0.58
CPNE8-203ENST00000538596 CAB39Q9Y376 341 aaPredicted RBP11.45□□□□□ -0.58
CPNE8-203ENST00000538596 METTL15A6NJ78 407 aa11.44□□□□□ -0.58
CPNE8-203ENST00000538596 HIDE1A8MVS5 230 aa11.44□□□□□ -0.58
CPNE8-203ENST00000538596 AQP9O43315 295 aa11.44□□□□□ -0.58
CPNE8-203ENST00000538596 RECKO95980 971 aa11.44□□□□□ -0.58
CPNE8-203ENST00000538596 SOD1P00441 154 aa11.44□□□□□ -0.58
CPNE8-203ENST00000538596 IL3P08700 152 aa11.44□□□□□ -0.58
CPNE8-203ENST00000538596 POU1F1P28069 291 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms