RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 RIBC2Q9H4K1 309 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 SPATA7Q9P0W8 599 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 NDRG4Q9ULP0 352 aaKnown RBP13.39□□□□□ -0.27
LIMK1-208ENST00000538333 ZFR2Q9UPR6 939 aaKnown RBP13.39□□□□□ -0.27
LIMK1-208ENST00000538333 HSPE1-MOB4S4R3N1 261 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 ATG2BQ96BY7 2078 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 A0A1W2PRB8 838 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 APODP05090 189 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 CYP4B1P13584 511 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 C5AR1P21730 350 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 EPHA2P29317 976 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 BSGP35613 385 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 CLCNKAP51800 687 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 REEP5Q00765 189 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 PIGFQ07326 219 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 DMPKQ09013 629 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 SCARB2Q14108 478 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 ELOAQ14241 798 aaKnown RBP13.39□□□□□ -0.27
LIMK1-208ENST00000538333 C11orf91Q3C1V1 193 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 DUS1LQ6P1R4 473 aaKnown RBP13.39□□□□□ -0.27
LIMK1-208ENST00000538333 CCDC80Q76M96 950 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 HDDC3Q8N4P3 179 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 LINC01555Q8NAE3 123 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 TP53I13Q8NBR0 393 aaPredicted RBP13.39□□□□□ -0.27
LIMK1-208ENST00000538333 SETD9Q8NE22 299 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 OR5AK3PQ8NH89 298 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 TAMM41Q96BW9 452 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 KXD1Q9BQD3 176 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 AIF1LQ9BQI0 150 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 TMEM121BQ9BXQ6 578 aaPredicted RBP13.39□□□□□ -0.27
LIMK1-208ENST00000538333 EPS8L2Q9H6S3 715 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 WDR26Q9H7D7 661 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 NDUFAF4Q9P032 175 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 WDR37Q9Y2I8 494 aa13.39□□□□□ -0.27
LIMK1-208ENST00000538333 A0A1W2PP55 124 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 KLHL33A6NCF5 533 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 ANKDD1BA6NHY2 528 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 ADH1BP00325 375 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 OPN1SWP03999 348 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 PCMT1P22061 227 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 TMBIM6P55061 237 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 IL5RAQ01344 420 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 LAIR1Q6GTX8 287 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 SYCE2Q6PIF2 218 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 RNF130Q86XS8 419 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 YAF2Q8IY57 180 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 TTC29Q8NA56 475 aaPredicted RBP13.38□□□□□ -0.27
LIMK1-208ENST00000538333 NFKBIDQ8NI38 313 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 SMPDL3AQ92484 453 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 ABHD8Q96I13 439 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 MYADMQ96S97 322 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 CDCA3Q99618 268 aaPredicted RBP13.38□□□□□ -0.27
LIMK1-208ENST00000538333 MYOCQ99972 504 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 DCUN1D5Q9BTE7 237 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 PCBD2Q9H0N5 130 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 LMAN2LQ9H0V9 348 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 IGFLR1Q9H665 355 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 AHSPQ9NZD4 102 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 ACSL5Q9ULC5 683 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 A0A1W2PPW3 197 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 PRAMEF25A6NGN4 478 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 EPOPA6NHQ4 379 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 RTCAO00442 366 aaKnown RBP13.38□□□□□ -0.27
LIMK1-208ENST00000538333 TBX19O60806 448 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 ANGPTL1O95841 491 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 SLC35G4P0C7Q5 338 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 ARAFP10398 606 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 JUNDP17535 347 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 DDCP20711 480 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 CXCR2P25025 360 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 RRM2P31350 389 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 CCR8P51685 355 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 PCBP3P57721 371 aaKnown RBP13.38□□□□□ -0.27
LIMK1-208ENST00000538333 CYP4F2P78329 520 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 MLF2Q15773 248 aaPredicted RBP13.38□□□□□ -0.27
LIMK1-208ENST00000538333 FGD3Q5JSP0 725 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 TRIM40Q6P9F5 258 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 B3GNT8Q7Z7M8 397 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 ZNF513Q8N8E2 541 aaPredicted RBP13.38□□□□□ -0.27
LIMK1-208ENST00000538333 BPIFB6Q8NFQ5 453 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 MUL1Q969V5 352 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 TM4SF18Q96CE8 201 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 MAGED4Q96JG8 741 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 F2RL3Q96RI0 385 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 PITX2Q99697 317 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 PBX4Q9BYU1 374 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 NT5DC2Q9H857 520 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 SLAMF7Q9NQ25 335 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 LHX9Q9NQ69 397 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 MIEF1Q9NQG6 463 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 KRT84Q9NSB2 600 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 TMEM184CQ9NVA4 438 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 MAP4K5Q9Y4K4 846 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 PCDHGB3Q9Y5G1 929 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 LYVE1Q9Y5Y7 322 aa13.38□□□□□ -0.27
LIMK1-208ENST00000538333 FEZF1A0PJY2 475 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 H7BY64 318 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 XPNPEP2O43895 674 aa13.37□□□□□ -0.27
LIMK1-208ENST00000538333 PAK4O96013 591 aaPredicted RBP13.37□□□□□ -0.27
LIMK1-208ENST00000538333 TNFRSF1BP20333 461 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms