RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 hCG_2039718K7EN88 272 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 LZTS3O60299 673 aaPredicted RBP8.85□□□□□ -0.99
DDB1-211ENST00000538280 MMP20O60882 483 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 SEMA3DO95025 777 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 FKBP9O95302 570 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 ARAFP10398 606 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 HLA-EP13747 358 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 KELP23276 732 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 FCARP24071 287 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 TEAD1P28347 426 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 VIPR2P41587 438 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 ARHGDIAP52565 204 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 NFATC3Q12968 1075 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 FADDQ13158 208 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 NFE2L1Q14494 772 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 ARHGAP19Q14CB8 494 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 AGERQ15109 404 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 PDGFRLQ15198 375 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 HIST2H2ACQ16777 129 aaPredicted RBP8.85□□□□□ -0.99
DDB1-211ENST00000538280 PRSS53Q2L4Q9 553 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 FAM78AQ5JUQ0 283 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 PRAMEF14Q5SWL7 426 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 PRAMEF13Q5VWM6 474 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 HIST2H2AA3Q6FI13 130 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 VTCN1Q7Z7D3 282 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 TRAPPC5Q8IUR0 188 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 CROCCP3Q8IVE0 287 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 DCUN1D3Q8IWE4 304 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 SYTL1Q8IYJ3 562 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 C11orf65Q8NCR3 313 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 GPR156Q8NFN8 814 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 OR4A15Q8NGL6 344 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 OR4C15Q8NGM1 316 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 CDC26Q8NHZ8 85 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 WDR48Q8TAF3 677 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 RAD51AP1Q96B01 352 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 ZNF764Q96H86 408 aaPredicted RBP8.85□□□□□ -0.99
DDB1-211ENST00000538280 SIGLEC11Q96RL6 698 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 PSD2Q9BQI7 771 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 DOHHQ9BU89 302 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 ADNPQ9H2P0 1102 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 RHBGQ9H310 441 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 NT5DC2Q9H857 520 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 REEP1Q9H902 201 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 SFXN1Q9H9B4 322 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 PLGRKTQ9HBL7 147 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 WASH6PQ9NQA3 447 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 C1GALT1Q9NS00 363 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 THSD1Q9NS62 852 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 DZANK1Q9NVP4 752 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 ETAA1Q9NY74 926 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 SPATA7Q9P0W8 599 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 DEC1Q9P2X7 70 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 THAP10Q9P2Z0 257 aaPredicted RBP8.85□□□□□ -0.99
DDB1-211ENST00000538280 HCN2Q9UL51 889 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 CA14Q9ULX7 337 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 ICKQ9UPZ9 632 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 PCYT1BQ9Y5K3 369 aaPredicted RBP8.85□□□□□ -0.99
DDB1-211ENST00000538280 HEMK1Q9Y5R4 338 aaPredicted RBP8.85□□□□□ -0.99
DDB1-211ENST00000538280 DNMT3AQ9Y6K1 912 aaPredicted RBP8.85□□□□□ -0.99
DDB1-211ENST00000538280 KMT2BQ9UMN6 2715 aaPredicted RBP8.85□□□□□ -0.99
DDB1-211ENST00000538280 NCOR2Q9Y618 2525 aa8.85□□□□□ -0.99
DDB1-211ENST00000538280 CEP250Q9BV73 2442 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 CACNA1IQ9P0X4 2223 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 GNG14A0A1W2PPG7 69 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 OTOL1A6NHN0 477 aaPredicted RBP8.84□□□□□ -0.99
DDB1-211ENST00000538280 PLK4O00444 970 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 SUV39H1O43463 412 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 NOL3O60936 208 aaKnown RBP8.84□□□□□ -0.99
DDB1-211ENST00000538280 ANGPTL1O95841 491 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 TBX6O95947 436 aaPredicted RBP8.84□□□□□ -0.99
DDB1-211ENST00000538280 GLULP15104 373 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 CCNA2P20248 432 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 EFNA1P20827 205 aaPredicted RBP8.84□□□□□ -0.99
DDB1-211ENST00000538280 CD247P20963 164 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 EEF1B2P24534 225 aaKnown RBP8.84□□□□□ -0.99
DDB1-211ENST00000538280 PTX3P26022 381 aaPredicted RBP8.84□□□□□ -0.99
DDB1-211ENST00000538280 CD6P30203 668 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 SERPINB1P30740 379 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 OPRD1P41143 372 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 P2RY2P41231 377 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 PLA2G16P53816 162 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 GP2P55259 537 aaKnown RBP8.84□□□□□ -0.99
DDB1-211ENST00000538280 PCBP3P57721 371 aaKnown RBP8.84□□□□□ -0.99
DDB1-211ENST00000538280 SELENOWP63302 87 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 HBA1P69905 142 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 SLC35A2P78381 396 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 PHEXP78562 749 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 REEP5Q00765 189 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 TEKQ02763 1124 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 TDGQ13569 410 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 STARD3Q14849 445 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 MAD2L1BPQ15013 274 aaPredicted RBP8.84□□□□□ -0.99
DDB1-211ENST00000538280 CYP2A13Q16696 494 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 CRB2Q5IJ48 1285 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 FGD3Q5JSP0 725 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 ATAT1Q5SQI0 421 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.84□□□□□ -0.99
DDB1-211ENST00000538280 GCNT6Q5T4J0 391 aa8.84□□□□□ -0.99
DDB1-211ENST00000538280 PIP5KL1Q5T9C9 394 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms