RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 TAB1Q15750 504 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 SPANXN4Q5MJ08 99 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 KIAA0895LQ68EN5 471 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 PM20D1Q6GTS8 502 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 DUS1LQ6P1R4 473 aaKnown RBP5.16□□□□□ -1.58
LRP6-203ENST00000538239 PARS2Q7L3T8 475 aaKnown RBP5.16□□□□□ -1.58
LRP6-203ENST00000538239 VN1R2Q8NFZ6 395 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 WDR60Q8WVS4 1066 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 RANBP9Q96S59 729 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 TMEM109Q9BVC6 243 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 PCDHGB5Q9Y5G0 923 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 A0A1W2PRG6 482 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 RTCAO00442 366 aaKnown RBP5.16□□□□□ -1.58
LRP6-203ENST00000538239 BCAT2O15382 392 aaPredicted RBP5.16□□□□□ -1.58
LRP6-203ENST00000538239 LDOC1O95751 146 aaPredicted RBP5.16□□□□□ -1.58
LRP6-203ENST00000538239 S1PR4O95977 384 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 H1F0P07305 194 aaKnown RBP5.16□□□□□ -1.58
LRP6-203ENST00000538239 RNH1P13489 461 aaKnown RBP5.16□□□□□ -1.58
LRP6-203ENST00000538239 IRS1P35568 1242 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 FOXK1P85037 733 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 SCAPQ12770 1279 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 TMEM240Q5SV17 173 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 CATSPEREQ5SY80 951 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 DNM1P34Q6PK57 102 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 USP30Q70CQ3 517 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 APLFQ8IW19 511 aaPredicted RBP5.16□□□□□ -1.58
LRP6-203ENST00000538239 KRTCAP2Q8N6L1 136 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 ZNF611Q8N823 705 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 SLC22A8Q8TCC7 542 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 SPPL3Q8TCT6 385 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 CRYGNQ8WXF5 182 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 SLCO2A1Q92959 643 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 TLCD1Q96CP7 247 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 TMCO6Q96DC7 493 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 CHID1Q9BWS9 393 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 C1QTNF1Q9BXJ1 281 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 SLC6A17Q9H1V8 727 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 RPF2Q9H7B2 306 aaKnown RBP5.16□□□□□ -1.58
LRP6-203ENST00000538239 SMPD3Q9NY59 655 aaPredicted RBP5.16□□□□□ -1.58
LRP6-203ENST00000538239 ATXN10Q9UBB4 475 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 IRAK3Q9Y616 596 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 EFCAB9A8MZ26 197 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 DIRAS1O95057 198 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 HRH2P25021 359 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 EDNRAP25101 427 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 FMO3P31513 532 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 BMP8BP34820 402 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 MLLT10P55197 1068 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 CTBP2P56545 445 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 ABATP80404 500 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 FCHO2Q0JRZ9 810 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 LRP8Q14114 963 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 PCLAFQ15004 111 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 HNRNPA1L2Q32P51 320 aaKnown RBP5.16□□□□□ -1.58
LRP6-203ENST00000538239 FAM26DQ5JW98 314 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 BMP8AQ7Z5Y6 402 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 CEP97Q8IW35 865 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 TMEM151BQ8IW70 566 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 IQCF2Q8IXL9 164 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 FITM2Q8N6M3 262 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 YIPF7Q8N8F6 280 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 SIGLEC10Q96LC7 697 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 MAP3K3Q99759 626 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 G6PC3Q9BUM1 346 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 LGR4Q9BXB1 951 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 PBX4Q9BYU1 374 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 TCF7L1Q9HCS4 588 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 HEMK1Q9Y5R4 338 aaPredicted RBP5.16□□□□□ -1.58
LRP6-203ENST00000538239 TJP1Q07157 1748 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 CIB4A0PJX0 185 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 PRSS38A1L453 326 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 CCDC182A6NF36 153 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 GJB3O75712 270 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 RLN1P04808 185 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 HBQ1P09105 142 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 UQCRC2P22695 453 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 IL4RP24394 825 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 CD38P28907 300 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 MAP3K8P41279 467 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 CBX5P45973 191 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 LEPRP48357 1165 aaKnown RBP5.16□□□□□ -1.58
LRP6-203ENST00000538239 ARSDP51689 593 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 ARG2P78540 354 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 SLC7A9P82251 487 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 GRM7Q14831 915 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 IER5LQ5T953 404 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 LIN54Q6MZP7 749 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 MFSD6LQ8IWD5 586 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 OR5K1Q8NHB7 308 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.16□□□□□ -1.587e-9■■■■■ 36.3
LRP6-203ENST00000538239 CENPNQ96H22 339 aaPredicted RBP5.16□□□□□ -1.58
LRP6-203ENST00000538239 CRELD1Q96HD1 420 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 TMEM74Q96NL1 305 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 CGREF1Q99674 301 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 MARCH5Q9NX47 278 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 PCDH10Q9P2E7 1040 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 PGAP2Q9UHJ9 254 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 PTRH2Q9Y3E5 179 aaKnown RBP5.16□□□□□ -1.58
LRP6-203ENST00000538239 TSC22D4Q9Y3Q8 395 aa5.16□□□□□ -1.58
LRP6-203ENST00000538239 EFCAB7A8K855 629 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms