RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 ZFP36L2P47974 494 aaKnown RBP14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 MC1RQ01726 317 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 MAD2L1Q13257 205 aaPredicted RBP14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 ILKQ13418 452 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 RPS6KA2Q15349 733 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 GSTA3Q16772 222 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 PDCD4Q53EL6 469 aaKnown RBP14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 AGKQ53H12 422 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 CDCP2Q5VXM1 449 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 ANKRD26P1Q6NSI1 321 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 NUDT13Q86X67 352 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 FUNDC1Q8IVP5 155 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 POU5F2Q8N7G0 328 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 OR5T3Q8NGG3 340 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 OR9A4Q8NGU2 314 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 PROKR1Q8TCW9 393 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 C16orf78Q8WTQ4 265 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 PMEPA1Q969W9 287 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 CTRCQ99895 268 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 CENPKQ9BS16 269 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 DDX31Q9H8H2 851 aaKnown RBP14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 ARL8BQ9NVJ2 186 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 SIRT5Q9NXA8 310 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 TEX10Q9NXF1 929 aaPredicted RBP14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 AHSPQ9NZD4 102 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 CCDC167Q9P0B6 97 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 EXO1Q9UQ84 846 aaKnown RBP14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 NAALAD2Q9Y3Q0 740 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 A0A0A6YYC8 382 aaPredicted RBP14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 FITM1A5D6W6 292 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 I3L1I5 382 aaPredicted RBP14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 SGK494L7N484 410 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 PSMD12O00232 456 aaPredicted RBP14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 FOXS1O43638 330 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 MYO1DO94832 1006 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 UBOX5O94941 541 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 FTH1P19P0C7X4 201 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 ATP4BP51164 291 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 TAS2R50P59544 299 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 STX1BP61266 288 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 SIM1P81133 766 aaPredicted RBP14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 E2F1Q01094 437 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 SLAMF1Q13291 335 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 RUNX2Q13950 521 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 SPRED3Q2MJR0 410 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 MARCH9Q86YJ5 346 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 BMPERQ8N8U9 685 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 METTL2AQ96IZ6 378 aaKnown RBP14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 TMEM74Q96NL1 305 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 TBCDQ9BTW9 1192 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 NLNQ9BYT8 704 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 MCM8Q9UJA3 840 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 PCDHGA1Q9Y5H4 931 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 CAPN7Q9Y6W3 813 aa14.85□□□□□ -0.03
SFSWAP-206ENST00000537582 FAM186AA6NE01 2351 aa14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 WASHC1A8K0Z3 465 aa14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 CSO75390 466 aaKnown RBP14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 RDH16O75452 317 aa14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 CBX6O95503 412 aa14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 IL3P08700 152 aa14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 MSL3P1P0C860 447 aa14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 SPTBP11277 2137 aa14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 PRPS2P11908 318 aa14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 ACPPP15309 386 aa14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 MAPK1P28482 360 aa14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 CCKBRP32239 447 aa14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 CSTF2P33240 577 aaKnown RBP eCLIP14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 MAPK12P53778 367 aa14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 ITGA1P56199 1179 aa14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 ZNF763Q0D2J5 394 aa14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 TRA2AQ13595 282 aaKnown RBP eCLIP14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 PRSS53Q2L4Q9 553 aa14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 ISXQ2M1V0 245 aa14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 TCTE1Q5JU00 501 aa14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 MANEAQ5SRI9 462 aa14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 HES3Q5TGS1 186 aa14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 ABHD13Q7L211 337 aa14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.84□□□□□ -0.039e-8■■■■■ 144.4
SFSWAP-206ENST00000537582 NETO1Q8TDF5 533 aa14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 TM4SF18Q96CE8 201 aa14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 COPS7BQ9H9Q2 264 aaPredicted RBP14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 DHCR7Q9UBM7 475 aaKnown RBP14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 FBXW2Q9UKT8 454 aa14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 TMEM184BQ9Y519 407 aaPredicted RBP14.84□□□□□ -0.03
SFSWAP-206ENST00000537582 LOC100653049A0A140TA62 436 aa14.83□□□□□ -0.04
SFSWAP-206ENST00000537582 A0A1W2PNU3 283 aaPredicted RBP14.83□□□□□ -0.04
SFSWAP-206ENST00000537582 NR5A2O00482 541 aa14.83□□□□□ -0.04
SFSWAP-206ENST00000537582 ZNF749O43361 778 aa14.83□□□□□ -0.04
SFSWAP-206ENST00000537582 GALR3O60755 368 aaPredicted RBP14.83□□□□□ -0.04
SFSWAP-206ENST00000537582 SLC22A3O75751 556 aa14.83□□□□□ -0.04
SFSWAP-206ENST00000537582 KRT34O76011 436 aa14.83□□□□□ -0.04
SFSWAP-206ENST00000537582 MT-CO3P00414 261 aa14.83□□□□□ -0.04
SFSWAP-206ENST00000537582 FAM58BPP0C7Q3 252 aa14.83□□□□□ -0.04
SFSWAP-206ENST00000537582 ITIH1P19827 911 aa14.83□□□□□ -0.04
SFSWAP-206ENST00000537582 GCGRP47871 477 aa14.83□□□□□ -0.04
SFSWAP-206ENST00000537582 MTTPP55157 894 aa14.83□□□□□ -0.04
SFSWAP-206ENST00000537582 CLDN8P56748 225 aa14.83□□□□□ -0.04
SFSWAP-206ENST00000537582 ACY1Q03154 408 aa14.83□□□□□ -0.04
SFSWAP-206ENST00000537582 GRM7Q14831 915 aa14.83□□□□□ -0.04
SFSWAP-206ENST00000537582 MRM1Q6IN84 353 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms