RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 TRPV3Q8NET8 790 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 OR5T2Q8NGG2 359 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 OR4D10Q8NGI6 311 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 MRGPRDQ8TDS7 321 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 GANCQ8TET4 914 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 SMPDL3AQ92484 453 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 CASP10Q92851 521 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 LRR1Q96L50 414 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 GUCD1Q96NT3 240 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 NTMT1Q9BV86 223 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 CLEC7AQ9BXN2 247 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 DDX47Q9H0S4 455 aaKnown RBP4.71□□□□□ -1.66
PRKDC-208ENST00000536710 WDR13Q9H1Z4 485 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 SYTL2Q9HCH5 934 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 NDUFA13Q9P0J0 144 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 UBQLN2Q9UHD9 624 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 ERVK-19Q9WJR5 959 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 SH3GLB1Q9Y371 365 aa4.71□□□□□ -1.66
PRKDC-208ENST00000536710 TRBV2A0A0J9YWF9 115 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 KRTAP29-1A8MX34 341 aaPredicted RBP4.7□□□□□ -1.66
PRKDC-208ENST00000536710 TCP10L2B9ZVM9 353 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 SLCO1B7G3V0H7 640 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 SURF4O15260 269 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 B4GAT1O43505 415 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 ECE2O60344 883 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 STBD1O95210 358 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 SLC4A1P02730 911 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 AMBPP02760 352 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 CCDC192P0DO97 292 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 ZNF18P17022 549 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 CEBPBP17676 345 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 ACKR3P25106 362 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 STIP1P31948 543 aaKnown RBP4.7□□□□□ -1.66
PRKDC-208ENST00000536710 TSFMP43897 325 aaKnown RBP4.7□□□□□ -1.66
PRKDC-208ENST00000536710 LUMP51884 338 aaPredicted RBP4.7□□□□□ -1.66
PRKDC-208ENST00000536710 GK2Q14410 553 aaPredicted RBP4.7□□□□□ -1.66
PRKDC-208ENST00000536710 SPHARQ15513 63 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 TAB1Q15750 504 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 C9orf50Q5SZB4 431 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 FIP1L1Q6UN15 594 aaKnown RBP4.7□□□□□ -1.66
PRKDC-208ENST00000536710 CD164L2Q6UWJ8 174 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 Q71RC1 249 aaPredicted RBP4.7□□□□□ -1.66
PRKDC-208ENST00000536710 MIER3Q7Z3K6 550 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 BATF2Q8N1L9 274 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 CCNYQ8ND76 341 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 RPLP0P6Q8NHW5 317 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 EXOC6Q8TAG9 804 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 SLC13A3Q8WWT9 602 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 TMEM190Q8WZ59 177 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 PRCCQ92733 491 aaPredicted RBP4.7□□□□□ -1.66
PRKDC-208ENST00000536710 GMPPAQ96IJ6 420 aaPredicted RBP4.7□□□□□ -1.66
PRKDC-208ENST00000536710 ZDHHC6Q9H6R6 413 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 ZNF665Q9H7R5 613 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 PLEK2Q9NYT0 353 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 ZNF319Q9P2F9 582 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 PILRAQ9UKJ1 303 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 RPH3AQ9Y2J0 694 aaPredicted RBP4.7□□□□□ -1.66
PRKDC-208ENST00000536710 LRP12Q9Y561 859 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 RNF123Q5XPI4 1314 aa4.7□□□□□ -1.66
PRKDC-208ENST00000536710 SCN5AQ14524 2016 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 RNF103-CHMP3A0A140T963 221 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 hCG_38984A0A1B0GV85 526 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 GTPBP10A4D1E9 387 aaKnown RBP4.69□□□□□ -1.66
PRKDC-208ENST00000536710 SLC9B1P1A6NJY1 282 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 RNF103O00237 685 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 SLC28A1O00337 649 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 SEC22BO75396 215 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 LRCH4O75427 683 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 CLDN1O95832 211 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 IGHEP01854 428 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 PTMSP20962 102 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 AHCYP23526 432 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 GIFP27352 417 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 FEN1P39748 380 aaKnown RBP4.69□□□□□ -1.66
PRKDC-208ENST00000536710 TNFSF10P50591 281 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 SRP54P61011 504 aaKnown RBP4.69□□□□□ -1.66
PRKDC-208ENST00000536710 GNB1P62873 340 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 GPR50Q13585 617 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 TSTA3Q13630 321 aaPredicted RBP4.69□□□□□ -1.66
PRKDC-208ENST00000536710 PDK1Q15118 436 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 CCDC6Q16204 474 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 STX1AQ16623 288 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 PARP10Q53GL7 1025 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 CUZD1Q86UP6 607 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 KLHDC8BQ8IXV7 354 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 SIDT2Q8NBJ9 832 aaKnown RBP4.69□□□□□ -1.66
PRKDC-208ENST00000536710 UBTD2Q8WUN7 234 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 XPO4Q9C0E2 1151 aaKnown RBP4.69□□□□□ -1.66
PRKDC-208ENST00000536710 WWTR1Q9GZV5 400 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 DCLRE1BQ9H816 532 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 MARCH7Q9H992 704 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 VIPAS39Q9H9C1 493 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 SPHK2Q9NRA0 654 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 FAM212BQ9NTI7 297 aaPredicted RBP4.69□□□□□ -1.66
PRKDC-208ENST00000536710 ATAD3AQ9NVI7 634 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 TEKT2Q9UIF3 430 aa4.69□□□□□ -1.66
PRKDC-208ENST00000536710 HOOK1Q9UJC3 728 aaKnown RBP4.69□□□□□ -1.66
PRKDC-208ENST00000536710 DHX29Q7Z478 1369 aaKnown RBP4.68□□□□□ -1.66
PRKDC-208ENST00000536710 MACROD2A1Z1Q3 448 aa4.68□□□□□ -1.66
PRKDC-208ENST00000536710 GLTPD2A6NH11 291 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms