RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 PLA2G16P53816 162 aa13.4□□□□□ -0.26
RTN3P1-201ENST00000536295 SLC7A5Q01650 507 aa13.4□□□□□ -0.26
RTN3P1-201ENST00000536295 OC90Q02509 493 aaPredicted RBP13.4□□□□□ -0.26
RTN3P1-201ENST00000536295 RUNX2Q13950 521 aa13.4□□□□□ -0.26
RTN3P1-201ENST00000536295 OR1C1Q15619 314 aa13.4□□□□□ -0.26
RTN3P1-201ENST00000536295 ZKSCAN8Q15776 578 aaPredicted RBP13.4□□□□□ -0.26
RTN3P1-201ENST00000536295 PDK4Q16654 411 aa13.4□□□□□ -0.26
RTN3P1-201ENST00000536295 XKR6Q5GH73 641 aa13.4□□□□□ -0.26
RTN3P1-201ENST00000536295 C1QL3Q5VWW1 255 aa13.4□□□□□ -0.26
RTN3P1-201ENST00000536295 SPINK14Q6IE38 97 aa13.4□□□□□ -0.26
RTN3P1-201ENST00000536295 ADNP2Q6IQ32 1131 aa13.4□□□□□ -0.26
RTN3P1-201ENST00000536295 FJX1Q86VR8 437 aa13.4□□□□□ -0.26
RTN3P1-201ENST00000536295 GAL3ST3Q96A11 431 aa13.4□□□□□ -0.26
RTN3P1-201ENST00000536295 KIAA1191Q96A73 305 aa13.4□□□□□ -0.26
RTN3P1-201ENST00000536295 MS4A6EQ96DS6 147 aa13.4□□□□□ -0.26
RTN3P1-201ENST00000536295 MRRFQ96E11 262 aaKnown RBP13.4□□□□□ -0.26
RTN3P1-201ENST00000536295 CAPS2Q9BXY5 557 aa13.4□□□□□ -0.26
RTN3P1-201ENST00000536295 HES7Q9BYE0 225 aa13.4□□□□□ -0.26
RTN3P1-201ENST00000536295 CDCP1Q9H5V8 836 aa13.4□□□□□ -0.26
RTN3P1-201ENST00000536295 ALG9Q9H6U8 611 aa13.4□□□□□ -0.26
RTN3P1-201ENST00000536295 CLK4Q9HAZ1 481 aaKnown RBP13.4□□□□□ -0.26
RTN3P1-201ENST00000536295 PRDM9Q9NQV7 894 aa13.4□□□□□ -0.26
RTN3P1-201ENST00000536295 GPRC5BQ9NZH0 403 aa13.4□□□□□ -0.26
RTN3P1-201ENST00000536295 TCRBV16S1A1N1A0A5B0 115 aa13.39□□□□□ -0.27
RTN3P1-201ENST00000536295 LRIT2A6NDA9 550 aa13.39□□□□□ -0.27
RTN3P1-201ENST00000536295 PRAMEF4O60810 478 aa13.39□□□□□ -0.27
RTN3P1-201ENST00000536295 UNC5CO95185 931 aa13.39□□□□□ -0.27
RTN3P1-201ENST00000536295 TFEBP19484 476 aa13.39□□□□□ -0.27
RTN3P1-201ENST00000536295 KCNC1P48547 511 aa13.39□□□□□ -0.27
RTN3P1-201ENST00000536295 PER3P56645 1201 aa13.39□□□□□ -0.27
RTN3P1-201ENST00000536295 DOC2AQ14183 400 aa13.39□□□□□ -0.27
RTN3P1-201ENST00000536295 PRAMEF9Q5VWM5 478 aa13.39□□□□□ -0.27
RTN3P1-201ENST00000536295 FAM47BQ8NA70 645 aa13.39□□□□□ -0.27
RTN3P1-201ENST00000536295 PDPRQ8NCN5 879 aa13.39□□□□□ -0.27
RTN3P1-201ENST00000536295 MDS2Q8NDY4 140 aa13.39□□□□□ -0.27
RTN3P1-201ENST00000536295 ARMC2Q8NEN0 867 aa13.39□□□□□ -0.27
RTN3P1-201ENST00000536295 ELP5Q8TE02 316 aa13.39□□□□□ -0.27
RTN3P1-201ENST00000536295 PTCD3Q96EY7 689 aaKnown RBP13.39□□□□□ -0.27
RTN3P1-201ENST00000536295 UBXN10Q96LJ8 280 aa13.39□□□□□ -0.27
RTN3P1-201ENST00000536295 PHACTR1Q9C0D0 580 aa13.39□□□□□ -0.27
RTN3P1-201ENST00000536295 REXO4Q9GZR2 422 aaKnown RBP13.39□□□□□ -0.27
RTN3P1-201ENST00000536295 NT5DC2Q9H857 520 aa13.39□□□□□ -0.27
RTN3P1-201ENST00000536295 PTBP2Q9UKA9 531 aaKnown RBP13.39□□□□□ -0.27
RTN3P1-201ENST00000536295 ASB1Q9Y576 335 aa13.39□□□□□ -0.27
RTN3P1-201ENST00000536295 SVILO95425 2214 aa13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 IGKV3D-11A0A0A0MRZ8 115 aa13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 SAGE2PA6NJ88 616 aa13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 SUPT3HB4E1H0 165 aa13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 B3GALT2O43825 422 aa13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 ZG16O60844 167 aa13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 SUPT3HO75486 399 aa13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 CLEC3AO75596 197 aa13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 STSP08842 583 aa13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 SLC35E2BP0CK96 405 aa13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 CD46P15529 392 aa13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 CD22P20273 847 aa13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 CKAP4Q07065 602 aaKnown RBP13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 DLG1Q12959 904 aa13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 CDKL4Q5MAI5 379 aa13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 ZNF787Q6DD87 383 aa13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 C8orf74Q6P047 294 aa13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 TRIM40Q6P9F5 258 aa13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 ZNF572Q7Z3I7 529 aaPredicted RBP13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 VN1R5Q7Z5H4 357 aa13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 TBC1D1Q86TI0 1168 aaPredicted RBP13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 RPS19BP1Q86WX3 136 aaKnown RBP13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 DNAJB8Q8NHS0 232 aa13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 STAG3L4Q8TBR4 150 aa13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 LRRC1Q9BTT6 524 aa13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 EHD1Q9H4M9 534 aa13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 COPS7BQ9H9Q2 264 aaPredicted RBP13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 PNO1Q9NRX1 252 aaKnown RBP13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 SEC14L3Q9UDX4 400 aa13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 SH3BGRL2Q9UJC5 107 aa13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 ZNF490Q9ULM2 529 aaPredicted RBP13.38□□□□□ -0.27
RTN3P1-201ENST00000536295 A0A088AWK7 358 aa13.37□□□□□ -0.27
RTN3P1-201ENST00000536295 TRGV8A0A0C4DH27 118 aa13.37□□□□□ -0.27
RTN3P1-201ENST00000536295 A0A1B0GUH1 482 aa13.37□□□□□ -0.27
RTN3P1-201ENST00000536295 UBXN8O00124 270 aa13.37□□□□□ -0.27
RTN3P1-201ENST00000536295 WISP2O76076 250 aa13.37□□□□□ -0.27
RTN3P1-201ENST00000536295 MYO1DO94832 1006 aa13.37□□□□□ -0.27
RTN3P1-201ENST00000536295 TBX6O95947 436 aaPredicted RBP13.37□□□□□ -0.27
RTN3P1-201ENST00000536295 LTA4HP09960 611 aaKnown RBP13.37□□□□□ -0.27
RTN3P1-201ENST00000536295 EPORP19235 508 aa13.37□□□□□ -0.27
RTN3P1-201ENST00000536295 ZNF10P21506 573 aaPredicted RBP13.37□□□□□ -0.27
RTN3P1-201ENST00000536295 CERS1P27544 350 aa13.37□□□□□ -0.27
RTN3P1-201ENST00000536295 GSTM2P28161 218 aa13.37□□□□□ -0.27
RTN3P1-201ENST00000536295 TPP2P29144 1249 aaPredicted RBP13.37□□□□□ -0.27
RTN3P1-201ENST00000536295 CRABP2P29373 138 aa13.37□□□□□ -0.27
RTN3P1-201ENST00000536295 EEF1DP29692 281 aaKnown RBP13.37□□□□□ -0.27
RTN3P1-201ENST00000536295 PPP2R1BP30154 601 aa13.37□□□□□ -0.27
RTN3P1-201ENST00000536295 HNRNPFP52597 415 aaKnown RBP13.37□□□□□ -0.27
RTN3P1-201ENST00000536295 RAB38P57729 211 aa13.37□□□□□ -0.27
RTN3P1-201ENST00000536295 IRF8Q02556 426 aa13.37□□□□□ -0.27
RTN3P1-201ENST00000536295 SLC13A2Q13183 592 aa13.37□□□□□ -0.27
RTN3P1-201ENST00000536295 CHIT1Q13231 466 aa13.37□□□□□ -0.27
RTN3P1-201ENST00000536295 BMPR2Q13873 1038 aa13.37□□□□□ -0.27
RTN3P1-201ENST00000536295 UAP1Q16222 522 aaPredicted RBP13.37□□□□□ -0.27
RTN3P1-201ENST00000536295 HIST2H2ACQ16777 129 aaPredicted RBP13.37□□□□□ -0.27
RTN3P1-201ENST00000536295 ZNF468Q5VIY5 522 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms