RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 PPP1R36Q96LQ0 422 aa14.77□□□□□ -0.04
CNN1-202ENST00000535659 GBP5Q96PP8 586 aa14.77□□□□□ -0.04
CNN1-202ENST00000535659 SORBS1Q9BX66 1292 aaKnown RBP14.77□□□□□ -0.04
CNN1-202ENST00000535659 DDX31Q9H8H2 851 aaKnown RBP14.77□□□□□ -0.04
CNN1-202ENST00000535659 CLK4Q9HAZ1 481 aaKnown RBP14.77□□□□□ -0.04
CNN1-202ENST00000535659 ZNF304Q9HCX3 659 aa14.77□□□□□ -0.04
CNN1-202ENST00000535659 ASCL3Q9NQ33 180 aa14.77□□□□□ -0.04
CNN1-202ENST00000535659 LHX9Q9NQ69 397 aa14.77□□□□□ -0.04
CNN1-202ENST00000535659 FGFR1OP2Q9NVK5 253 aa14.77□□□□□ -0.04
CNN1-202ENST00000535659 C1orf109Q9NX04 203 aa14.77□□□□□ -0.04
CNN1-202ENST00000535659 ADAM21Q9UKJ8 722 aa14.77□□□□□ -0.04
CNN1-202ENST00000535659 ASPMQ8IZT6 3477 aa14.77□□□□□ -0.04
CNN1-202ENST00000535659 SGK494L7N484 410 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 LSM1O15116 133 aaKnown RBP14.76□□□□□ -0.05
CNN1-202ENST00000535659 PEX11AO75192 247 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 VPS4BO75351 444 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 ONECUT2O95948 504 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 CCNYL3P0C7X3 344 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 HIST1H1TP22492 207 aaPredicted RBP14.76□□□□□ -0.05
CNN1-202ENST00000535659 ATP5A1P25705 553 aaKnown RBP14.76□□□□□ -0.05
CNN1-202ENST00000535659 SSR2P43308 183 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 OR1D4P47884 311 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 MTTPP55157 894 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 DCDP81605 110 aaKnown RBP14.76□□□□□ -0.05
CNN1-202ENST00000535659 ACSM2AQ08AH3 577 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 KIAA0040Q15053 153 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 NR6A1Q15406 480 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 SPIN4Q56A73 249 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 VWA5B1Q5TIE3 1220 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 ZNF385CQ66K41 422 aaPredicted RBP14.76□□□□□ -0.05
CNN1-202ENST00000535659 ACSM2BQ68CK6 577 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 EPGNQ6UW88 154 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 C6orf15Q6UXA7 325 aaPredicted RBP14.76□□□□□ -0.05
CNN1-202ENST00000535659 PAGE2Q7Z2X7 111 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 MAVSQ7Z434 540 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 DSELQ8IZU8 1212 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 METTL27Q8N6F8 245 aaPredicted RBP14.76□□□□□ -0.05
CNN1-202ENST00000535659 C1orf52Q8N6N3 182 aaKnown RBP14.76□□□□□ -0.05
CNN1-202ENST00000535659 ACOT4Q8N9L9 421 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 GALNT6Q8NCL4 622 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 NXPE2Q96DL1 559 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 PPP3R2Q96LZ3 170 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 SERINC2Q96SA4 455 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 DPH2Q9BQC3 489 aaPredicted RBP14.76□□□□□ -0.05
CNN1-202ENST00000535659 ZNF717Q9BY31 904 aaPredicted RBP14.76□□□□□ -0.05
CNN1-202ENST00000535659 AKTIPQ9H8T0 292 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 COPS7BQ9H9Q2 264 aaPredicted RBP14.76□□□□□ -0.05
CNN1-202ENST00000535659 LRTM1Q9HBL6 345 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 SIRT5Q9NXA8 310 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 ADAM29Q9UKF5 820 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 MAU2Q9Y6X3 613 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 ACACBO00763 2458 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 GMNCA6NCL1 334 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 B3GALT2O43825 422 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 BRINP1O60477 761 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 DNAJB6O75190 326 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 DLGAP3O95886 979 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 KLK1P06870 262 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 PIM1P11309 404 aaPredicted RBP14.76□□□□□ -0.05
CNN1-202ENST00000535659 ALOX15P16050 662 aaPredicted RBP14.76□□□□□ -0.05
CNN1-202ENST00000535659 AGXTP21549 392 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 CD82P27701 267 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 SEC24CP53992 1094 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 AQP5P55064 265 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 GALNTL6Q49A17 601 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 NKAIN1Q4KMZ8 207 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 ATP6AP1LQ52LC2 224 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 RFTN2Q52LD8 501 aaPredicted RBP14.76□□□□□ -0.05
CNN1-202ENST00000535659 C6orf136Q5SQH8 315 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 ZNF793Q6ZN11 406 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 TIPARPQ7Z3E1 657 aaKnown RBP14.76□□□□□ -0.05
CNN1-202ENST00000535659 COMMD6Q7Z4G1 85 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 NUDT13Q86X67 352 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 ZFAND4Q86XD8 727 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 ZCCHC7Q8N3Z6 543 aaKnown RBP14.76□□□□□ -0.05
CNN1-202ENST00000535659 AMER3Q8N944 861 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.76□□□□□ -0.05
CNN1-202ENST00000535659 COL26A1Q96A83 441 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 C11orf24Q96F05 449 aaPredicted RBP14.76□□□□□ -0.05
CNN1-202ENST00000535659 NPLQ9BXD5 320 aaPredicted RBP14.76□□□□□ -0.05
CNN1-202ENST00000535659 TRIM55Q9BYV6 548 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 WDR55Q9H6Y2 383 aaPredicted RBP14.76□□□□□ -0.05
CNN1-202ENST00000535659 AKIRIN1Q9H9L7 192 aaPredicted RBP14.76□□□□□ -0.05
CNN1-202ENST00000535659 THSD1Q9NS62 852 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 PADI1Q9ULC6 663 aa14.76□□□□□ -0.05
CNN1-202ENST00000535659 TEX51A0A1B0GUA7 166 aa14.75□□□□□ -0.05
CNN1-202ENST00000535659 SDHDO14521 159 aa14.75□□□□□ -0.05
CNN1-202ENST00000535659 EEDO75530 441 aaKnown RBP14.75□□□□□ -0.05
CNN1-202ENST00000535659 SCELO95171 688 aa14.75□□□□□ -0.05
CNN1-202ENST00000535659 TROVE2P10155 538 aaKnown RBP eCLIP14.75□□□□□ -0.05
CNN1-202ENST00000535659 ITGAXP20702 1163 aa14.75□□□□□ -0.05
CNN1-202ENST00000535659 TPP2P29144 1249 aaPredicted RBP14.75□□□□□ -0.05
CNN1-202ENST00000535659 EPHA3P29320 983 aa14.75□□□□□ -0.05
CNN1-202ENST00000535659 IDH3AP50213 366 aa14.75□□□□□ -0.05
CNN1-202ENST00000535659 RUNX2Q13950 521 aa14.75□□□□□ -0.05
CNN1-202ENST00000535659 MAP7Q14244 749 aa14.75□□□□□ -0.05
CNN1-202ENST00000535659 SLC9A5Q14940 896 aa14.75□□□□□ -0.05
CNN1-202ENST00000535659 SMU1Q2TAY7 513 aa14.75□□□□□ -0.05
CNN1-202ENST00000535659 SLC9B1Q4ZJI4 515 aa14.75□□□□□ -0.05
CNN1-202ENST00000535659 CCNYL2Q5T2Q4 361 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms