RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	DNAJB13	P59910	316 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	RPA4	Q13156	261 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	PMS2P3	Q13401	168 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ZNF234	Q14588	700 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	NPTX1	Q15818	432 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	YIPF7	Q8N8F6	280 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	IL17F	Q96PD4	163 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	DUSP23	Q9BVJ7	150 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	NOBOX	O60393	691 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TRMU	O75648	421 aa	Known RBP	15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CD9	P21926	228 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	GGT5	P36269	586 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	GPX6	P59796	221 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ABHD17B	Q5VST6	288 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	C1orf189	Q5VU69	101 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ZNF572	Q7Z3I7	529 aa	Predicted RBP	15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	RNF130	Q86XS8	419 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	RBM12B	Q8IXT5	1001 aa	Known RBP	15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TTC9B	Q8N6N2	239 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CHST14	Q8NCH0	376 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	NPL	Q9BXD5	320 aa	Predicted RBP	15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	MBD2	Q9UBB5	411 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	MYO9B	Q13459	2157 aa		15.16	■□□□□ 0.02
NCAPD3-213	ENST00000534532	AIRE	O43918	545 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	MTHFD1	P11586	935 aa	Known RBP	15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	GALK1	P51570	392 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	SCRN3	Q0VDG4	424 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	IL18R1	Q13478	541 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CBFB	Q13951	182 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	HNRNPA1L2	Q32P51	320 aa	Known RBP	15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	OR2T5	Q6IEZ7	315 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	GLIS1	Q8NBF1	620 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	OR10Q1	Q8NGQ4	319 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	OR2T29	Q8NH02	315 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ORAI3	Q9BRQ5	295 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	POMP	Q9Y244	141 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532		A0A1W2PP18	115 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TMEM233	B4DJY2	109 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	PRKD3	O94806	890 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	IFI30	P13284	250 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CREB1	P16220	341 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	GLDC	P23378	1020 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CLRN1	P58418	232 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TCEAL1	Q15170	157 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	C6orf52	Q5T4I8	152 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	UNQ6126/PRO20091	Q6UXV3	157 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	FRMD7	Q6ZUT3	714 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	LRRC25	Q8N386	305 aa	Predicted RBP	15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	MCHR1	Q99705	422 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	UCK2	Q9BZX2	261 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	POLR2J2	Q9GZM3	115 aa	Known RBP	15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	POU2F3	Q9UKI9	436 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	WASF2	Q9Y6W5	498 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532		E7EQ34	232 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	EMC8	O43402	210 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	BCAS2	O75934	225 aa	Predicted RBP	15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	PTCRA	Q6ISU1	281 aa	Predicted RBP	15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	CRTC1	Q6UUV9	634 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	C15orf39	Q6ZRI6	1047 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	P2RY8	Q86VZ1	359 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	GAL3ST1	Q99999	423 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	SP140L	Q9H930	580 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TMEM184C	Q9NVA4	438 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ENTPD2	Q9Y5L3	495 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	HOXC13	P31276	330 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	EIF1AX	P47813	144 aa	Known RBP	15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	PXN	P49023	591 aa	Predicted RBP	15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	SLC18A1	P54219	525 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TRAM2	Q15035	370 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	NR0B2	Q15466	257 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	KCTD21	Q4G0X4	260 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	PM20D1	Q6GTS8	502 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532		Q6ZSR6	202 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	WDTC1	Q8N5D0	677 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	RHEBL1	Q8TAI7	183 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	TOE1	Q96GM8	510 aa	Known RBP	15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	NAA11	Q9BSU3	229 aa	Predicted RBP	15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	LIPT1	Q9Y234	373 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	RGPD8	O14715	1765 aa	Predicted RBP	15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	PHRF1	Q9P1Y6	1649 aa	Known RBP	15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	S1PR4	O95977	384 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ARF5	P84085	180 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	MSS51	Q4VC12	460 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	NXPE4	Q6UWF7	544 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	ZNF100	Q8IYN0	542 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	THEM6	Q8WUY1	208 aa		15.15	■□□□□ 0.02
NCAPD3-213	ENST00000534532	SHOX2	O60902	331 aa	Predicted RBP	15.14	■□□□□ 0.01
NCAPD3-213	ENST00000534532	TIA1	P31483	386 aa	Known RBP eCLIP	15.14	■□□□□ 0.01
NCAPD3-213	ENST00000534532	OR12D2	P58182	307 aa		15.14	■□□□□ 0.01
NCAPD3-213	ENST00000534532	SF3B4	Q15427	424 aa	Known RBP eCLIP	15.14	■□□□□ 0.01	4e-6	■■■□□ 19.2
NCAPD3-213	ENST00000534532	NSDHL	Q15738	373 aa		15.14	■□□□□ 0.01
NCAPD3-213	ENST00000534532	FAM182A	Q5T1J6	154 aa		15.14	■□□□□ 0.01
NCAPD3-213	ENST00000534532	CPXM2	Q8N436	756 aa		15.14	■□□□□ 0.01
NCAPD3-213	ENST00000534532	OR4K1	Q8NGD4	311 aa		15.14	■□□□□ 0.01
NCAPD3-213	ENST00000534532	OR1F2P	Q96R84	312 aa		15.14	■□□□□ 0.01
NCAPD3-213	ENST00000534532	HCN4	Q9Y3Q4	1203 aa		15.14	■□□□□ 0.01
NCAPD3-213	ENST00000534532	GRIP1	Q9Y3R0	1128 aa		15.14	■□□□□ 0.01
NCAPD3-213	ENST00000534532	FKBP7	Q9Y680	259 aa		15.14	■□□□□ 0.01
NCAPD3-213	ENST00000534532	EDNRA	P25101	427 aa		15.14	■□□□□ 0.01
NCAPD3-213	ENST00000534532	ITGB7	P26010	798 aa		15.14	■□□□□ 0.01

Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms