RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 IGKV3D-11A0A0A0MRZ8 115 aa20.1■□□□□ 0.81
PKP3-211ENST00000534401 NSG1A0A0A6YYJ2 146 aa20.1■□□□□ 0.81
PKP3-211ENST00000534401 A0A1W2PPM1 405 aa20.1■□□□□ 0.81
PKP3-211ENST00000534401 A8MT66 165 aa20.1■□□□□ 0.81
PKP3-211ENST00000534401 SERPINA7P05543 415 aa20.1■□□□□ 0.81
PKP3-211ENST00000534401 NUDT17P0C025 328 aa20.1■□□□□ 0.81
PKP3-211ENST00000534401 PYGBP11216 843 aa20.1■□□□□ 0.81
PKP3-211ENST00000534401 OLR1P78380 273 aa20.1■□□□□ 0.81
PKP3-211ENST00000534401 BTN3A2P78410 334 aa20.1■□□□□ 0.81
PKP3-211ENST00000534401 TRAF3Q13114 568 aa20.1■□□□□ 0.81
PKP3-211ENST00000534401 DEPDC1Q5TB30 811 aa20.1■□□□□ 0.81
PKP3-211ENST00000534401 FAAH2Q6GMR7 532 aa20.1■□□□□ 0.81
PKP3-211ENST00000534401 EMBQ6PCB8 327 aa20.1■□□□□ 0.81
PKP3-211ENST00000534401 QSOX2Q6ZRP7 698 aa20.1■□□□□ 0.81
PKP3-211ENST00000534401 LANCL3Q6ZV70 420 aa20.1■□□□□ 0.81
PKP3-211ENST00000534401 CPEB2Q7Z5Q1 589 aaKnown RBP20.1■□□□□ 0.81
PKP3-211ENST00000534401 ANKRD37Q7Z713 158 aa20.1■□□□□ 0.81
PKP3-211ENST00000534401 RBMXL3Q8N7X1 1067 aaKnown RBP20.1■□□□□ 0.81
PKP3-211ENST00000534401 SRFBP1Q8NEF9 429 aaKnown RBP20.1■□□□□ 0.81
PKP3-211ENST00000534401 WDR20Q8TBZ3 569 aa20.1■□□□□ 0.81
PKP3-211ENST00000534401 ZNF483Q8TF39 744 aaPredicted RBP20.1■□□□□ 0.81
PKP3-211ENST00000534401 METTL21AQ8WXB1 218 aa20.1■□□□□ 0.81
PKP3-211ENST00000534401 CAVIN3Q969G5 261 aa20.1■□□□□ 0.81
PKP3-211ENST00000534401 F2RL3Q96RI0 385 aa20.1■□□□□ 0.81
PKP3-211ENST00000534401 SERINC2Q96SA4 455 aa20.1■□□□□ 0.81
PKP3-211ENST00000534401 TUBB6Q9BUF5 446 aa20.1■□□□□ 0.81
PKP3-211ENST00000534401 ZNF160Q9HCG1 818 aa20.1■□□□□ 0.81
PKP3-211ENST00000534401 HEMK1Q9Y5R4 338 aaPredicted RBP20.1■□□□□ 0.81
PKP3-211ENST00000534401 DPM1O60762 260 aa20.09■□□□□ 0.81
PKP3-211ENST00000534401 PRR35P0CG20 571 aa20.09■□□□□ 0.81
PKP3-211ENST00000534401 JAK1P23458 1154 aa20.09■□□□□ 0.81
PKP3-211ENST00000534401 EEF1A2Q05639 463 aaKnown RBP20.09■□□□□ 0.81
PKP3-211ENST00000534401 MINDY4Q4G0A6 757 aa20.09■□□□□ 0.81
PKP3-211ENST00000534401 TRIM40Q6P9F5 258 aa20.09■□□□□ 0.81
PKP3-211ENST00000534401 PARP9Q8IXQ6 854 aa20.09■□□□□ 0.81
PKP3-211ENST00000534401 KBTBD2Q8IY47 623 aa20.09■□□□□ 0.81
PKP3-211ENST00000534401 TEX19Q8NA77 164 aa20.09■□□□□ 0.81
PKP3-211ENST00000534401 HUS1BQ8NHY5 278 aa20.09■□□□□ 0.81
PKP3-211ENST00000534401 CCT6BQ92526 530 aa20.09■□□□□ 0.81
PKP3-211ENST00000534401 CMTM7Q96FZ5 175 aa20.09■□□□□ 0.81
PKP3-211ENST00000534401 FAR2Q96K12 515 aa20.09■□□□□ 0.81
PKP3-211ENST00000534401 NSUN5Q96P11 429 aaKnown RBP20.09■□□□□ 0.81
PKP3-211ENST00000534401 TBCDQ9BTW9 1192 aa20.09■□□□□ 0.81
PKP3-211ENST00000534401 NOL11Q9H8H0 719 aaKnown RBP20.09■□□□□ 0.81
PKP3-211ENST00000534401 ACTR8Q9H981 624 aa20.09■□□□□ 0.81
PKP3-211ENST00000534401 KCMF1Q9P0J7 381 aa20.09■□□□□ 0.81
PKP3-211ENST00000534401 C19orf25Q9UFG5 118 aaPredicted RBP20.09■□□□□ 0.81
PKP3-211ENST00000534401 TBK1Q9UHD2 729 aa20.09■□□□□ 0.81
PKP3-211ENST00000534401 DCDC2Q9UHG0 476 aa20.09■□□□□ 0.81
PKP3-211ENST00000534401 RNF11Q9Y3C5 154 aa20.09■□□□□ 0.81
PKP3-211ENST00000534401 CLDN16Q9Y5I7 305 aa20.09■□□□□ 0.81
PKP3-211ENST00000534401 CPAMD8Q8IZJ3 1885 aa20.08■□□□□ 0.81
PKP3-211ENST00000534401 A0A088AWK7 358 aa20.08■□□□□ 0.81
PKP3-211ENST00000534401 FOXE1O00358 373 aaPredicted RBP20.08■□□□□ 0.81
PKP3-211ENST00000534401 DLX3O60479 287 aa20.08■□□□□ 0.81
PKP3-211ENST00000534401 CDH16O75309 829 aa20.08■□□□□ 0.81
PKP3-211ENST00000534401 CLDN9O95484 217 aa20.08■□□□□ 0.81
PKP3-211ENST00000534401 ALPPP05187 535 aa20.08■□□□□ 0.81
PKP3-211ENST00000534401 ICAM2P13598 275 aa20.08■□□□□ 0.81
PKP3-211ENST00000534401 ZNF10P21506 573 aaPredicted RBP20.08■□□□□ 0.81
PKP3-211ENST00000534401 ITGA3P26006 1051 aa20.08■□□□□ 0.81
PKP3-211ENST00000534401 SOX11P35716 441 aa20.08■□□□□ 0.81
PKP3-211ENST00000534401 MTTPP55157 894 aa20.08■□□□□ 0.81
PKP3-211ENST00000534401 GGTA1PQ4G0N0 100 aa20.08■□□□□ 0.81
PKP3-211ENST00000534401 KHDRBS2Q5VWX1 349 aaKnown RBP20.08■□□□□ 0.81
PKP3-211ENST00000534401 JMJD6Q6NYC1 403 aaPredicted RBP20.08■□□□□ 0.81
PKP3-211ENST00000534401 ZNF793Q6ZN11 406 aa20.08■□□□□ 0.81
PKP3-211ENST00000534401 CHSY3Q70JA7 882 aa20.08■□□□□ 0.81
PKP3-211ENST00000534401 OR52B6Q8NGF0 335 aa20.08■□□□□ 0.81
PKP3-211ENST00000534401 THOC3Q96J01 351 aaKnown RBP20.08■□□□□ 0.81
PKP3-211ENST00000534401 KCNC2Q96PR1 638 aa20.08■□□□□ 0.81
PKP3-211ENST00000534401 LMF1Q96S06 567 aa20.08■□□□□ 0.81
PKP3-211ENST00000534401 ROGDIQ9GZN7 287 aa20.08■□□□□ 0.81
PKP3-211ENST00000534401 DMRT3Q9NQL9 472 aa20.08■□□□□ 0.81
PKP3-211ENST00000534401 RAB21Q9UL25 225 aa20.08■□□□□ 0.81
PKP3-211ENST00000534401 EMCNQ9ULC0 261 aa20.08■□□□□ 0.81
PKP3-211ENST00000534401 DAPP1Q9UN19 280 aa20.08■□□□□ 0.81
PKP3-211ENST00000534401 PRRC2CQ9Y520 2896 aaKnown RBP20.08■□□□□ 0.8
PKP3-211ENST00000534401 A0A0G2JN53 185 aa20.07■□□□□ 0.8
PKP3-211ENST00000534401 FAM227AF5H4B4 570 aa20.07■□□□□ 0.8
PKP3-211ENST00000534401 GOLGA8RI6L899 631 aa20.07■□□□□ 0.8
PKP3-211ENST00000534401 CYR61O00622 381 aa20.07■□□□□ 0.8
PKP3-211ENST00000534401 SLC28A2O43868 658 aa20.07■□□□□ 0.8
PKP3-211ENST00000534401 SORBS2O94875 1100 aaKnown RBP20.07■□□□□ 0.8
PKP3-211ENST00000534401 ATP5A1P25705 553 aaKnown RBP20.07■□□□□ 0.8
PKP3-211ENST00000534401 TSFMP43897 325 aaKnown RBP20.07■□□□□ 0.8
PKP3-211ENST00000534401 PLA2G16P53816 162 aa20.07■□□□□ 0.8
PKP3-211ENST00000534401 RAB38P57729 211 aa20.07■□□□□ 0.8
PKP3-211ENST00000534401 HERVK_113P63132 956 aa20.07■□□□□ 0.8
PKP3-211ENST00000534401 BTG2P78543 158 aa20.07■□□□□ 0.8
PKP3-211ENST00000534401 SLC18A2Q05940 514 aa20.07■□□□□ 0.8
PKP3-211ENST00000534401 TGM3Q08188 693 aa20.07■□□□□ 0.8
PKP3-211ENST00000534401 RAPSNQ13702 412 aa20.07■□□□□ 0.8
PKP3-211ENST00000534401 ABRAXAS2Q15018 415 aa20.07■□□□□ 0.8
PKP3-211ENST00000534401 NSDHLQ15738 373 aa20.07■□□□□ 0.8
PKP3-211ENST00000534401 ERCC6LQ2NKX8 1250 aa20.07■□□□□ 0.8
PKP3-211ENST00000534401 C10orf62Q5T681 223 aaPredicted RBP20.07■□□□□ 0.8
PKP3-211ENST00000534401 PLAG1Q6DJT9 500 aa20.07■□□□□ 0.8
PKP3-211ENST00000534401 H3F3CQ6NXT2 135 aa20.07■□□□□ 0.8
PKP3-211ENST00000534401 SCUBE1Q8IWY4 988 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms