RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 SMIM10Q96HG1 83 aa19.88■□□□□ 0.77
SSH3-211ENST00000534112 TRIM54Q9BYV2 358 aa19.88■□□□□ 0.77
SSH3-211ENST00000534112 KLHL31Q9H511 634 aa19.88■□□□□ 0.77
SSH3-211ENST00000534112 INTS1Q8N201 2190 aaKnown RBP19.88■□□□□ 0.77
SSH3-211ENST00000534112 PABPN1LA6NDY0 278 aaKnown RBP19.87■□□□□ 0.77
SSH3-211ENST00000534112 URADA6NGE7 173 aa19.87■□□□□ 0.77
SSH3-211ENST00000534112 MYO1DO94832 1006 aa19.87■□□□□ 0.77
SSH3-211ENST00000534112 AHSGP02765 367 aa19.87■□□□□ 0.77
SSH3-211ENST00000534112 MSX1P28360 303 aa19.87■□□□□ 0.77
SSH3-211ENST00000534112 NR0B1P51843 470 aaKnown RBP19.87■□□□□ 0.77
SSH3-211ENST00000534112 ART1P52961 327 aa19.87■□□□□ 0.77
SSH3-211ENST00000534112 PMPCAQ10713 525 aa19.87■□□□□ 0.77
SSH3-211ENST00000534112 EMC4Q5J8M3 183 aa19.87■□□□□ 0.77
SSH3-211ENST00000534112 CCDC71Q8IV32 467 aaPredicted RBP19.87■□□□□ 0.77
SSH3-211ENST00000534112 CA13Q8N1Q1 262 aa19.87■□□□□ 0.77
SSH3-211ENST00000534112 NAT8LQ8N9F0 302 aa19.87■□□□□ 0.77
SSH3-211ENST00000534112 TRPV3Q8NET8 790 aa19.87■□□□□ 0.77
SSH3-211ENST00000534112 ATL1Q8WXF7 558 aa19.87■□□□□ 0.77
SSH3-211ENST00000534112 TSNARE1Q96NA8 513 aa19.87■□□□□ 0.77
SSH3-211ENST00000534112 DEFB127Q9H1M4 99 aa19.87■□□□□ 0.77
SSH3-211ENST00000534112 TIMMDC1Q9NPL8 285 aa19.87■□□□□ 0.77
SSH3-211ENST00000534112 GUCA1CO95843 209 aa19.86■□□□□ 0.77
SSH3-211ENST00000534112 REEP5Q00765 189 aa19.86■□□□□ 0.77
SSH3-211ENST00000534112 CRYMQ14894 314 aa19.86■□□□□ 0.77
SSH3-211ENST00000534112 TERF2Q15554 542 aa19.86■□□□□ 0.77
SSH3-211ENST00000534112 ZNF662Q6ZS27 426 aa19.86■□□□□ 0.77
SSH3-211ENST00000534112 TRIM58Q8NG06 486 aa19.86■□□□□ 0.77
SSH3-211ENST00000534112 ZNF559Q9BR84 538 aa19.86■□□□□ 0.77
SSH3-211ENST00000534112 ZNF223Q9UK11 482 aaPredicted RBP19.86■□□□□ 0.77
SSH3-211ENST00000534112 PPIEQ9UNP9 301 aaKnown RBP19.86■□□□□ 0.77
SSH3-211ENST00000534112 MMACHCQ9Y4U1 282 aa19.86■□□□□ 0.77
SSH3-211ENST00000534112 C4orf51C9J302 202 aa19.85■□□□□ 0.77
SSH3-211ENST00000534112 DIAPH2O60879 1101 aa19.85■□□□□ 0.77
SSH3-211ENST00000534112 TUBB4AP04350 444 aa19.85■□□□□ 0.77
SSH3-211ENST00000534112 SERPINA6P08185 405 aa19.85■□□□□ 0.77
SSH3-211ENST00000534112 HOXD4P09016 255 aaPredicted RBP19.85■□□□□ 0.77
SSH3-211ENST00000534112 PGAM1P18669 254 aa19.85■□□□□ 0.77
SSH3-211ENST00000534112 PGGT1BP53609 377 aa19.85■□□□□ 0.77
SSH3-211ENST00000534112 RBBP5Q15291 538 aaKnown RBP19.85■□□□□ 0.77
SSH3-211ENST00000534112 ACAD11Q709F0 780 aa19.85■□□□□ 0.77
SSH3-211ENST00000534112 GABPB2Q8TAK5 448 aaPredicted RBP19.85■□□□□ 0.77
SSH3-211ENST00000534112 CREB3L4Q8TEY5 395 aa19.85■□□□□ 0.77
SSH3-211ENST00000534112 VMP1Q96GC9 406 aa19.85■□□□□ 0.77
SSH3-211ENST00000534112 SEC16BQ96JE7 1060 aa19.85■□□□□ 0.77
SSH3-211ENST00000534112 PDLIM2Q96JY6 352 aa19.85■□□□□ 0.77
SSH3-211ENST00000534112 AIF1LQ9BQI0 150 aa19.85■□□□□ 0.77
SSH3-211ENST00000534112 AICDAQ9GZX7 198 aa19.85■□□□□ 0.77
SSH3-211ENST00000534112 PELI2Q9HAT8 420 aa19.85■□□□□ 0.77
SSH3-211ENST00000534112 PNO1Q9NRX1 252 aaKnown RBP19.85■□□□□ 0.77
SSH3-211ENST00000534112 DEPPQ9NTK1 212 aa19.85■□□□□ 0.77
SSH3-211ENST00000534112 KCMF1Q9P0J7 381 aa19.85■□□□□ 0.77
SSH3-211ENST00000534112 KCNN3Q9UGI6 736 aa19.85■□□□□ 0.77
SSH3-211ENST00000534112 ERVK-11Q9UQG0 969 aa19.85■□□□□ 0.77
SSH3-211ENST00000534112 YARS2Q9Y2Z4 477 aaKnown RBP19.85■□□□□ 0.77
SSH3-211ENST00000534112 ENO2P09104 434 aaPredicted RBP19.84■□□□□ 0.77
SSH3-211ENST00000534112 SSR4P51571 173 aa19.84■□□□□ 0.77
SSH3-211ENST00000534112 GPR143P51810 404 aa19.84■□□□□ 0.77
SSH3-211ENST00000534112 NUP107P57740 925 aa19.84■□□□□ 0.77
SSH3-211ENST00000534112 PPIAP62937 165 aaKnown RBP19.84■□□□□ 0.77
SSH3-211ENST00000534112 PDAP1Q13442 181 aaKnown RBP19.84■□□□□ 0.77
SSH3-211ENST00000534112 TOR1AIP1Q5JTV8 583 aa19.84■□□□□ 0.77
SSH3-211ENST00000534112 CES4AQ5XG92 561 aa19.84■□□□□ 0.77
SSH3-211ENST00000534112 PAOXQ6QHF9 649 aa19.84■□□□□ 0.77
SSH3-211ENST00000534112 NXPE4Q6UWF7 544 aa19.84■□□□□ 0.77
SSH3-211ENST00000534112 C16orf47Q6ZP98 133 aaPredicted RBP19.84■□□□□ 0.77
SSH3-211ENST00000534112 TMEM200AQ86VY9 491 aa19.84■□□□□ 0.77
SSH3-211ENST00000534112 THOC6Q86W42 341 aaKnown RBP19.84■□□□□ 0.77
SSH3-211ENST00000534112 CNTN4Q8IWV2 1026 aa19.84■□□□□ 0.77
SSH3-211ENST00000534112 SCUBE1Q8IWY4 988 aa19.84■□□□□ 0.77
SSH3-211ENST00000534112 PSD4Q8NDX1 1056 aa19.84■□□□□ 0.77
SSH3-211ENST00000534112 NCLNQ969V3 563 aa19.84■□□□□ 0.77
SSH3-211ENST00000534112 POM121Q96HA1 1249 aa19.84■□□□□ 0.77
SSH3-211ENST00000534112 DYRK1BQ9Y463 629 aa19.84■□□□□ 0.77
SSH3-211ENST00000534112 MAP1AP78559 2803 aaPredicted RBP19.84■□□□□ 0.77
SSH3-211ENST00000534112 NIPBLQ6KC79 2804 aaeCLIP19.83■□□□□ 0.77
SSH3-211ENST00000534112 PINLYPA6NC86 204 aa19.83■□□□□ 0.77
SSH3-211ENST00000534112 NPIPA2E9PIF3 369 aa19.83■□□□□ 0.77
SSH3-211ENST00000534112 NPIPA3F8WFD2 350 aa19.83■□□□□ 0.77
SSH3-211ENST00000534112 PRKNO60260 465 aaPredicted RBP19.83■□□□□ 0.77
SSH3-211ENST00000534112 ZFAND5O76080 213 aa19.83■□□□□ 0.77
SSH3-211ENST00000534112 CCDC175P0C221 793 aa19.83■□□□□ 0.77
SSH3-211ENST00000534112 PPP2R1BP30154 601 aa19.83■□□□□ 0.77
SSH3-211ENST00000534112 DNAJA1P31689 397 aaKnown RBP19.83■□□□□ 0.77
SSH3-211ENST00000534112 BTN3A2P78410 334 aa19.83■□□□□ 0.77
SSH3-211ENST00000534112 GXYLT1Q4G148 440 aa19.83■□□□□ 0.77
SSH3-211ENST00000534112 HECTD2Q5U5R9 776 aa19.83■□□□□ 0.77
SSH3-211ENST00000534112 CCDC137Q6PK04 289 aaKnown RBP19.83■□□□□ 0.77
SSH3-211ENST00000534112 TMPRSS11BQ86T26 416 aa19.83■□□□□ 0.77
SSH3-211ENST00000534112 OR5M3Q8NGP4 307 aa19.83■□□□□ 0.77
SSH3-211ENST00000534112 CCDC77Q9BR77 488 aa19.83■□□□□ 0.77
SSH3-211ENST00000534112 LIN28AQ9H9Z2 209 aaKnown RBP19.83■□□□□ 0.77
SSH3-211ENST00000534112 IKZF3Q9UKT9 509 aa19.83■□□□□ 0.77
SSH3-211ENST00000534112 VWA7Q9Y334 891 aa19.83■□□□□ 0.77
SSH3-211ENST00000534112 CLDN16Q9Y5I7 305 aa19.83■□□□□ 0.77
SSH3-211ENST00000534112 NAV3Q8IVL0 2385 aa19.83■□□□□ 0.76
SSH3-211ENST00000534112 ZNF407Q9C0G0 2248 aa19.82■□□□□ 0.76
SSH3-211ENST00000534112 TMEM200CA6NKL6 621 aa19.82■□□□□ 0.76
SSH3-211ENST00000534112 FAM166BA8MTA8 275 aa19.82■□□□□ 0.76
SSH3-211ENST00000534112 A8MVJ9 347 aa19.82■□□□□ 0.76
SSH3-211ENST00000534112 TGFBR3LH3BV60 316 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms