RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 SLC16A5O15375 505 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 ZSCAN9O15535 394 aaPredicted RBP2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 TTI1O43156 1089 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 PHF1O43189 567 aaPredicted RBP2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 CDC40O60508 579 aaKnown RBP eCLIP2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 USP1O94782 785 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 GFPT2O94808 682 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 BMP10O95393 424 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 TSPAN12O95859 305 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 HPP00738 406 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 GASTP01350 101 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 RAF1P04049 648 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 SERPINA7P05543 415 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 PYGLP06737 847 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 UQCRHP07919 91 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 COX6A1P12074 109 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 UGT2B7P16662 529 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 IL1R2P27930 398 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 PDHA2P29803 388 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 UQCRC1P31930 480 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 PRKCIP41743 596 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 CD86P42081 329 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 NSG1P42857 185 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 KLK7P49862 253 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 FMO1Q01740 532 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 MEF2AQ02078 507 aaPredicted RBP2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 LRRC63Q05C16 580 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 CACNG1Q06432 222 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 PRKAA1Q13131 559 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 DPYSQ14117 519 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 NOMO1Q15155 1222 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 PCBP2Q15366 365 aaKnown RBP eCLIP2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 SYCP1Q15431 976 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 OR1C1Q15619 314 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 EXOC3L4Q17RC7 722 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 FILIP1LQ4L180 1135 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 HSP90AA4PQ58FG1 418 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 C19orf54Q5BKX5 351 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 ACAD10Q6JQN1 1059 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 PAMR1Q6UXH9 720 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 NAPRTQ6XQN6 538 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 CYP4V2Q6ZWL3 525 aaPredicted RBP2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 ENOSF1Q7L5Y1 443 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 GALNTL5Q7Z4T8 443 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 CAMKMTQ7Z624 323 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 NT5DC3Q86UY8 548 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 WDR75Q8IWA0 830 aaKnown RBP2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 RHOT2Q8IXI1 618 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 MYO1HQ8N1T3 1032 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 TRAM1L1Q8N609 369 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 CPSF7Q8N684 471 aaKnown RBP2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 C1orf162Q8NEQ5 155 aaPredicted RBP2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 OR52E1Q8NGJ3 308 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 FLVCR1-AS1Q8TAF5 88 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 SUN3Q8TAQ9 357 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 FAM57AQ8TBR7 257 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 STT3BQ8TCJ2 826 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 CCHCR1Q8TD31 782 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 PHF10Q8WUB8 498 aaKnown RBP2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 ASB5Q8WWX0 329 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 TMEM158Q8WZ71 300 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 RND1Q92730 232 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 N4BP2L2Q92802 583 aaPredicted RBP2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 SLCO2A1Q92959 643 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 NACC2Q96BF6 587 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 PTCD3Q96EY7 689 aaKnown RBP2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 DHTKD1Q96HY7 919 aaPredicted RBP2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 RBM41Q96IZ5 413 aaKnown RBP2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 ZNF599Q96NL3 588 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 MCEEQ96PE7 176 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 OR2A14Q96R47 310 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 AIFM2Q9BRQ8 373 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 CRB3Q9BUF7 120 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 SNRNP25Q9BV90 132 aaKnown RBP2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 SELENOOQ9BVL4 669 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 TDRD1Q9BXT4 1180 aaKnown RBP2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 PITPNM3Q9BZ71 974 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 DEFB127Q9H1M4 99 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 FAM96AQ9H5X1 160 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 KIR3DX1Q9H7L2 352 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 PCDH9Q9HC56 1237 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 IL26Q9NPH9 171 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 TXLNGQ9NUQ3 528 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 RBM22Q9NW64 420 aaKnown RBP eCLIP2.79□□□□□ -1.966e-7■□□□□ 8.2
CHMP4A-208ENST00000534106 TRMT1Q9NXH9 659 aaKnown RBP2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 EURLQ9NYK6 297 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 PKD2L2Q9NZM6 624 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 ZIM2Q9NZV7 527 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 ADAM22Q9P0K1 906 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 C3orf18Q9UK00 162 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 MAN1B1Q9UKM7 699 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 PLAGL1Q9UM63 463 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 AP1M2Q9Y6Q5 423 aa2.79□□□□□ -1.96
CHMP4A-208ENST00000534106 NCOA6Q14686 2063 aaPredicted RBP2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 CCDC88CQ9P219 2028 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 LOC105369274A0A096LPK9 316 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 IGHV1-45A0A0A0MS14 117 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 LOC102723532A0A0G2JNH3 316 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 A0A1B0GX78 115 aa2.78□□□□□ -1.96
CHMP4A-208ENST00000534106 SYCE3A1L190 88 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms