RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 RAB33BQ9H082 229 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 RMND5AQ9H871 391 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 EPHA6Q9UF33 1036 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 MCM8Q9UJA3 840 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 ADAM29Q9UKF5 820 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 POMT2Q9UKY4 750 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 A0A1W2PP18 115 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 OR2A25A4D2G3 310 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 ZSCAN9O15535 394 aaPredicted RBP10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 NDUFS4O43181 175 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 PCDH7O60245 1069 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 CPNE6O95741 557 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 TGFB1P01137 390 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 RPLP0P05388 317 aaKnown RBP10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 SERPIND1P05546 499 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 ANXA4P09525 319 aaPredicted RBP10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 TYRP1P17643 537 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 MAGP20916 626 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 CDH3P22223 829 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 CD1CP29017 333 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 PEBP1P30086 187 aaKnown RBP10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 TIA1P31483 386 aaKnown RBP eCLIP10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 CLDN8P56748 225 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 CCDC157Q569K6 752 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 DEPDC1Q5TB30 811 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 KIAA1614Q5VZ46 1190 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 NIPAL1Q6NVV3 410 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 PRMT9Q6P2P2 845 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 TRIM40Q6P9F5 258 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 PAOXQ6QHF9 649 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 WDR74Q6RFH5 385 aaPredicted RBP10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 MSANTD1Q6ZTZ1 278 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 ASRGL1Q7L266 308 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 R3HCC1LQ7Z5L2 792 aaKnown RBP10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 PAQR7Q86WK9 346 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 PLXDC1Q8IUK5 500 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 METTL4Q8N3J2 472 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 C1orf52Q8N6N3 182 aaKnown RBP10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 POU5F2Q8N7G0 328 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 ZNF740Q8NDX6 193 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 CHTF18Q8WVB6 975 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 JPH3Q8WXH2 748 aaPredicted RBP10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 NCSTNQ92542 709 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 APIPQ96GX9 242 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 FCRL1Q96LA6 429 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 GFM1Q96RP9 751 aaKnown RBP10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 DPYSL5Q9BPU6 564 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 MS4A8Q9BY19 250 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 SEMA6CQ9H3T2 930 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 LRRN3Q9H3W5 708 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 SLC6A20Q9NP91 592 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 C1GALT1Q9NS00 363 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 ATAD3AQ9NVI7 634 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 GIMAP2Q9UG22 337 aa10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 LEF1Q9UJU2 399 aaPredicted RBP10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 RRP15Q9Y3B9 282 aaKnown RBP10.43□□□□□ -0.74
CCDC90B-218ENST00000533761 UNC13CQ8NB66 2214 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 C15orf38-AP3S2A0A0A6YYH1 394 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 IGKV1-8A0A0C4DH67 115 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 FEZF1A0PJY2 475 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 TLCD2A6NGC4 264 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 AIM2O14862 343 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 HAT1O14929 419 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 KCNK5O95279 499 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 CPA2P48052 419 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 CORO7P57737 925 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 C21orf58P58505 322 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 CYP4F2P78329 520 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 CCL7P80098 99 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 FOXM1Q08050 763 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 TBL3Q12788 808 aaKnown RBP10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 SPIDRQ14159 915 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 PTGR1Q14914 329 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 NKAIN2Q5VXU1 208 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 IRGCQ6NXR0 463 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 FIGLAQ6QHK4 219 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 HACD2Q6Y1H2 254 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 USP53Q70EK8 1073 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 ABHD13Q7L211 337 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 COMMD6Q7Z4G1 85 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 ARPINQ7Z6K5 226 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 ASPGQ86U10 573 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 TMEM132CQ8N3T6 1108 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 NATD1Q8N6N6 113 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 ANKRD53Q8N9V6 530 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 RBM15BQ8NDT2 890 aaKnown RBP10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 PROKR1Q8TCW9 393 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 SLC13A3Q8WWT9 602 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 RSC1A1Q92681 617 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 TESCQ96BS2 214 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 TCTN2Q96GX1 697 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 HOPXQ9BPY8 73 aaPredicted RBP10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 SYNDIG1Q9H7V2 258 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 COPS7BQ9H9Q2 264 aaPredicted RBP10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 DLL3Q9NYJ7 618 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 TAS2R1Q9NYW7 299 aa10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 PRPF19Q9UMS4 504 aaKnown RBP10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 CNOT1A5YKK6 2376 aaKnown RBP10.42□□□□□ -0.74
CCDC90B-218ENST00000533761 SPAARA0A1B0GVQ0 90 aa10.41□□□□□ -0.74
CCDC90B-218ENST00000533761 A0A1W2PQM1 296 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms