RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 MTERF1Q99551 399 aaKnown RBP12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 SLC7A5P2Q9GIP4 190 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 C20orf27Q9GZN8 174 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 NKIRAS1Q9NYS0 192 aa12.07□□□□□ -0.48
RPUSD4-208ENST00000533628 A0A0A6YYC8 382 aaPredicted RBP12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 I3L1I5 382 aaPredicted RBP12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 MANBAO00462 879 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 ITM2AO43736 263 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 GALR3O60755 368 aaPredicted RBP12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 CNOT3O75175 753 aaKnown RBP12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 DNAJB6O75190 326 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 NSA2O95478 260 aaKnown RBP12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 TGFB1P01137 390 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 FGF4P08620 206 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 ALOX12P18054 663 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 F8A1P23610 371 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 ARL1P40616 181 aaPredicted RBP12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 HTR6P50406 440 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 RPS13P62277 151 aaKnown RBP12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 C10orf62Q5T681 223 aaPredicted RBP12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 DEPDC1Q5TB30 811 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 ABHD17CQ6PCB6 329 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 TRPM8Q7Z2W7 1104 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 PIGWQ7Z7B1 504 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 CUZD1Q86UP6 607 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 METTL27Q8N6F8 245 aaPredicted RBP12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 OR9A4Q8NGU2 314 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 METTL6Q8TCB7 284 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 MR1Q95460 341 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 GAL3ST3Q96A11 431 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 MTFMTQ96DP5 389 aaKnown RBP12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 CMTM7Q96FZ5 175 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 DPH1Q9BZG8 443 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 SHCBP1LQ9BZQ2 653 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 ZNF395Q9H8N7 513 aaPredicted RBP12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 NDOR1Q9UHB4 597 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 RAXQ9Y2V3 346 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 TIMM22Q9Y584 194 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 AHCTF1Q8WYP5 2266 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 SEC16AO15027 2179 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 SERTM1A2A2V5 107 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 H0YIG0 161 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 KLHL18O94889 574 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 PDYNP01213 254 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 CCNYL3P0C7X3 344 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 IL1RNP18510 177 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 RAB8AP61006 207 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 NCALDP61601 193 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 STXBP1P61764 594 aaKnown RBP12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 SRSF6Q13247 344 aaKnown RBP12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 DDX39BQ13838 428 aaKnown RBP12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 HERC3Q15034 1050 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 KHDRBS2Q5VWX1 349 aaKnown RBP12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 MRPL14Q6P1L8 145 aaKnown RBP12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 OR2L5Q8NG80 312 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 KCNE4Q8WWG9 221 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 ZCCHC14Q8WYQ9 949 aaKnown RBP12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 ZNF317Q96PQ6 595 aaPredicted RBP12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 REXO4Q9GZR2 422 aaKnown RBP12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 OR51B5Q9H339 312 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 ZNF304Q9HCX3 659 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 PRDM7Q9NQW5 492 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 CROTQ9UKG9 612 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 CDC14AQ9UNH5 594 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 SNX6Q9UNH7 406 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 MAU2Q9Y6X3 613 aa12.06□□□□□ -0.48
RPUSD4-208ENST00000533628 TMEM114B3SHH9 223 aa12.05□□□□□ -0.48
RPUSD4-208ENST00000533628 EFSO43281 561 aa12.05□□□□□ -0.48
RPUSD4-208ENST00000533628 RAB40ALP0C0E4 278 aa12.05□□□□□ -0.48
RPUSD4-208ENST00000533628 ATP6V1C1P21283 382 aa12.05□□□□□ -0.48
RPUSD4-208ENST00000533628 AGXTP21549 392 aa12.05□□□□□ -0.48
RPUSD4-208ENST00000533628 PTX3P26022 381 aaPredicted RBP12.05□□□□□ -0.48
RPUSD4-208ENST00000533628 SERPINB3P29508 390 aa12.05□□□□□ -0.48
RPUSD4-208ENST00000533628 KCNJ2P63252 427 aa12.05□□□□□ -0.48
RPUSD4-208ENST00000533628 DSG2Q14126 1118 aa12.05□□□□□ -0.48
RPUSD4-208ENST00000533628 UGT3A2Q3SY77 523 aa12.05□□□□□ -0.48
RPUSD4-208ENST00000533628 TMEM35AQ53FP2 167 aa12.05□□□□□ -0.48
RPUSD4-208ENST00000533628 ABHD13Q7L211 337 aa12.05□□□□□ -0.48
RPUSD4-208ENST00000533628 OVCH1Q7RTY7 1134 aa12.05□□□□□ -0.48
RPUSD4-208ENST00000533628 TMEM151BQ8IW70 566 aa12.05□□□□□ -0.48
RPUSD4-208ENST00000533628 SREK1Q8WXA9 508 aaKnown RBP12.05□□□□□ -0.48
RPUSD4-208ENST00000533628 SORT1Q99523 831 aa12.05□□□□□ -0.48
RPUSD4-208ENST00000533628 ZNF717Q9BY31 904 aaPredicted RBP12.05□□□□□ -0.48
RPUSD4-208ENST00000533628 SLC26A1Q9H2B4 701 aa12.05□□□□□ -0.48
RPUSD4-208ENST00000533628 ELOVL6Q9H5J4 265 aa12.05□□□□□ -0.48
RPUSD4-208ENST00000533628 ANKHQ9HCJ1 492 aa12.05□□□□□ -0.48
RPUSD4-208ENST00000533628 NAALAD2Q9Y3Q0 740 aa12.05□□□□□ -0.48
RPUSD4-208ENST00000533628 PCDHGA6Q9Y5G7 932 aa12.05□□□□□ -0.48
RPUSD4-208ENST00000533628 GMEB1Q9Y692 573 aa12.05□□□□□ -0.48
RPUSD4-208ENST00000533628 IGLV3-12A0A075B6K2 115 aa12.04□□□□□ -0.48
RPUSD4-208ENST00000533628 URADA6NGE7 173 aa12.04□□□□□ -0.48
RPUSD4-208ENST00000533628 SGK494L7N484 410 aa12.04□□□□□ -0.48
RPUSD4-208ENST00000533628 ERI3O43414 337 aaKnown RBP12.04□□□□□ -0.48
RPUSD4-208ENST00000533628 SH3BGRLO75368 114 aa12.04□□□□□ -0.48
RPUSD4-208ENST00000533628 LYPLA1O75608 230 aaPredicted RBP12.04□□□□□ -0.48
RPUSD4-208ENST00000533628 KRT6AP02538 564 aa12.04□□□□□ -0.48
RPUSD4-208ENST00000533628 KRT6BP04259 564 aa12.04□□□□□ -0.48
RPUSD4-208ENST00000533628 UROSP10746 265 aa12.04□□□□□ -0.48
RPUSD4-208ENST00000533628 CHN1P15882 459 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms