RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 GLB1L3Q8NCI6 653 aaPredicted RBP17.63■□□□□ 0.41
SMPD1-208ENST00000533123 BAHD1Q8TBE0 780 aaPredicted RBP17.63■□□□□ 0.41
SMPD1-208ENST00000533123 ZDHHC12Q96GR4 267 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 RAB33BQ9H082 229 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 KCNH6Q9H252 994 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 EPB41L1Q9H4G0 881 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 DMRT3Q9NQL9 472 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 EPHA6Q9UF33 1036 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 NEUROG3Q9Y4Z2 214 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 TRBC2A0A5B9 178 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 SLC9B1P1A6NJY1 282 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 EIF4E1BA6NMX2 242 aaKnown RBP17.63■□□□□ 0.41
SMPD1-208ENST00000533123 H3BNX3 289 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 SAP18O00422 153 aaKnown RBP17.63■□□□□ 0.41
SMPD1-208ENST00000533123 LDOC1O95751 146 aaPredicted RBP17.63■□□□□ 0.41
SMPD1-208ENST00000533123 ATP6V1C1P21283 382 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 PEX19P40855 299 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 PHC1P78364 1004 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 RAE1P78406 368 aaKnown RBP17.63■□□□□ 0.41
SMPD1-208ENST00000533123 CCL7P80098 99 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 FBXO42Q6P3S6 717 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 DNAJC14Q6Y2X3 702 aaPredicted RBP17.63■□□□□ 0.41
SMPD1-208ENST00000533123 C11orf24Q96F05 449 aaPredicted RBP17.63■□□□□ 0.41
SMPD1-208ENST00000533123 TRAPPC9Q96Q05 1148 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 NUDT22Q9BRQ3 303 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 STOML1Q9UBI4 398 aa17.63■□□□□ 0.41
SMPD1-208ENST00000533123 ATXN7L1Q9ULK2 861 aaPredicted RBP17.63■□□□□ 0.41
SMPD1-208ENST00000533123 A0A1W2PQM1 296 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 ANKDD1BA6NHY2 528 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 AKAP10O43572 662 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 FKBP9O95302 570 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 TGFB1P01137 390 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 STATHP02808 62 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 IL6P05231 212 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 ACPPP15309 386 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 DUSP3P51452 185 aaPredicted RBP17.62■□□□□ 0.41
SMPD1-208ENST00000533123 SNAP47Q5SQN1 464 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 NANOGP8Q6NSW7 305 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 PLXDC1Q8IUK5 500 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 CDC26Q8NHZ8 85 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 OR52E6Q96RD3 313 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 PITHD1Q9GZP4 211 aaPredicted RBP17.62■□□□□ 0.41
SMPD1-208ENST00000533123 RHBGQ9H310 441 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 OR51B5Q9H339 312 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 NT5DC2Q9H857 520 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 NANOGQ9H9S0 305 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 C1GALT1Q9NS00 363 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 ANGPTL2Q9UKU9 493 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 KLK4Q9Y5K2 254 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 IGHV5-51A0A0C4DH38 117 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 A0A0J9YVX5 310 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 RPLP0P05388 317 aaKnown RBP17.62■□□□□ 0.41
SMPD1-208ENST00000533123 CKMT2P17540 419 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 SELPLGQ14242 412 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 CYP2R1Q6VVX0 501 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 LRRC74BQ6ZQY2 392 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 SPATA24Q86W54 205 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 RIMKLAQ8IXN7 391 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 GTF2H4Q92759 462 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 PHOX2BQ99453 314 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 MACROD1Q9BQ69 325 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 SYNDIG1Q9H7V2 258 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 FAM60AQ9NP50 221 aa17.62■□□□□ 0.41
SMPD1-208ENST00000533123 RUVBL1Q9Y265 456 aaKnown RBP17.62■□□□□ 0.41
SMPD1-208ENST00000533123 TLCD2A6NGC4 264 aa17.61■□□□□ 0.41
SMPD1-208ENST00000533123 SERPIND1P05546 499 aa17.61■□□□□ 0.41
SMPD1-208ENST00000533123 SOX11P35716 441 aa17.61■□□□□ 0.41
SMPD1-208ENST00000533123 PIK3CBP42338 1070 aa17.61■□□□□ 0.41
SMPD1-208ENST00000533123 MTPNP58546 118 aa17.61■□□□□ 0.41
SMPD1-208ENST00000533123 MAPKAPK3Q16644 382 aa17.61■□□□□ 0.41
SMPD1-208ENST00000533123 PGS1Q32NB8 556 aa17.61■□□□□ 0.41
SMPD1-208ENST00000533123 TMPRSS9Q7Z410 1059 aa17.61■□□□□ 0.41
SMPD1-208ENST00000533123 IFNEQ86WN2 208 aa17.61■□□□□ 0.41
SMPD1-208ENST00000533123 NAXDQ8IW45 347 aa17.61■□□□□ 0.41
SMPD1-208ENST00000533123 C19orf47Q8N9M1 422 aaKnown RBP17.61■□□□□ 0.41
SMPD1-208ENST00000533123 CHTF18Q8WVB6 975 aa17.61■□□□□ 0.41
SMPD1-208ENST00000533123 SARGQ9BW04 601 aa17.61■□□□□ 0.41
SMPD1-208ENST00000533123 VAPAQ9P0L0 249 aa17.61■□□□□ 0.41
SMPD1-208ENST00000533123 ANKMY1Q9P2S6 941 aa17.61■□□□□ 0.41
SMPD1-208ENST00000533123 FTSJ1Q9UET6 329 aa17.61■□□□□ 0.41
SMPD1-208ENST00000533123 EGFL7Q9UHF1 273 aa17.61■□□□□ 0.41
SMPD1-208ENST00000533123 USP22Q9UPT9 525 aa17.61■□□□□ 0.41
SMPD1-208ENST00000533123 PCDHGA4Q9Y5G9 962 aa17.61■□□□□ 0.41
SMPD1-208ENST00000533123 DPPA5A6NC42 116 aa17.6■□□□□ 0.41
SMPD1-208ENST00000533123 FOXE1O00358 373 aaPredicted RBP17.6■□□□□ 0.41
SMPD1-208ENST00000533123 TBX6O95947 436 aaPredicted RBP17.6■□□□□ 0.41
SMPD1-208ENST00000533123 PWP1Q13610 501 aa17.6■□□□□ 0.41
SMPD1-208ENST00000533123 WDR74Q6RFH5 385 aaPredicted RBP17.6■□□□□ 0.41
SMPD1-208ENST00000533123 ANKRD46Q86W74 232 aa17.6■□□□□ 0.41
SMPD1-208ENST00000533123 TBC1D19Q8N5T2 526 aa17.6■□□□□ 0.41
SMPD1-208ENST00000533123 OR7A2PQ8NGA2 310 aa17.6■□□□□ 0.41
SMPD1-208ENST00000533123 CGREF1Q99674 301 aa17.6■□□□□ 0.41
SMPD1-208ENST00000533123 LRRN3Q9H3W5 708 aa17.6■□□□□ 0.41
SMPD1-208ENST00000533123 PIF1Q9H611 641 aa17.6■□□□□ 0.41
SMPD1-208ENST00000533123 PILRAQ9UKJ1 303 aa17.6■□□□□ 0.41
SMPD1-208ENST00000533123 TSC22D4Q9Y3Q8 395 aa17.6■□□□□ 0.41
SMPD1-208ENST00000533123 CROCCQ5TZA2 2017 aa17.6■□□□□ 0.41
SMPD1-208ENST00000533123 A8MU76 341 aa17.6■□□□□ 0.41
SMPD1-208ENST00000533123 HCRTR1O43613 425 aa17.6■□□□□ 0.41
SMPD1-208ENST00000533123 KCNH1O95259 989 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms