RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 TPP2P29144 1249 aaPredicted RBP17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 TSPAN7P41732 249 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 SSR2P43308 183 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 FAM214AQ32MH5 1076 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 YOD1Q5VVQ6 348 aaPredicted RBP17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 NUDT13Q86X67 352 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 MARK4Q96L34 752 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 CATSPER2Q96P56 530 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 ZNF385DQ9H6B1 395 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 MCM8Q9UJA3 840 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 G3BP2Q9UN86 482 aaKnown RBP17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 EIF3LQ9Y262 564 aaKnown RBP17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 GPR45Q9Y5Y3 372 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 A0A0A6YYD5 115 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 GBAP04062 536 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 SDC1P18827 310 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 NCF2P19878 526 aaPredicted RBP17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 BTN3A2P78410 334 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 TERF2Q15554 542 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 GSTA3Q16772 222 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 MUM1Q2TAK8 710 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 DEFB134Q4QY38 66 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 PRAMEF17Q5VTA0 474 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 RAB11FIP2Q7L804 512 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 PRSS41Q7RTY9 318 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 TMPRSS12Q86WS5 348 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 PDSS2Q86YH6 399 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 ZCCHC7Q8N3Z6 543 aaKnown RBP17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 LIX1Q8N485 282 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 AMER3Q8N944 861 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 ACOT4Q8N9L9 421 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 EBPLQ9BY08 206 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 BRINP2Q9C0B6 783 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 ROGDIQ9GZN7 287 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 NMUR2Q9GZQ4 415 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 APMAPQ9HDC9 416 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 CUTCQ9NTM9 273 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 LOXL2Q9Y4K0 774 aa17.05■□□□□ 0.32
PPP1CA-208ENST00000532446 FER1L5A0AVI2 2057 aa17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 A0A088AWK7 358 aa17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 CCDC187A0A096LP49 1063 aa17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 POLR1CO15160 346 aaPredicted RBP17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 ZNF749O43361 778 aa17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 FOXS1O43638 330 aa17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 GALR3O60755 368 aaPredicted RBP17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 CCDC22O60826 627 aa17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 ANXA4P09525 319 aaPredicted RBP17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 G6PDP11413 515 aa17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 PRPS2P11908 318 aa17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 IDO1P14902 403 aa17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 IL1RNP18510 177 aa17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 ZNF10P21506 573 aaPredicted RBP17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 TACR1P25103 407 aa17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 CERS1P27544 350 aa17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 MRPL19P49406 292 aaKnown RBP17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 ARSFP54793 590 aa17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 MTTPP55157 894 aa17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 IRX1P78414 480 aaPredicted RBP17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 EIF3IQ13347 325 aaKnown RBP17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 COL9A2Q14055 689 aaPredicted RBP17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 CCNYL2Q5T2Q4 361 aa17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 PWWP2BQ6NUJ5 590 aa17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 CYP20A1Q6UW02 462 aa17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 MTDHQ86UE4 582 aaKnown RBP17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 PPP1R3BQ86XI6 285 aa17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 ADAMTS14Q8WXS8 1223 aa17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 SERINC2Q96SA4 455 aa17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 NDC1Q9BTX1 674 aa17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 COPS7BQ9H9Q2 264 aaPredicted RBP17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 ANKHQ9HCJ1 492 aa17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 SAR1AQ9NR31 198 aa17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 SDR39U1Q9NRG7 319 aaPredicted RBP17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 NAALAD2Q9Y3Q0 740 aa17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 COPG1Q9Y678 874 aaKnown RBP17.04■□□□□ 0.32
PPP1CA-208ENST00000532446 GNG14A0A1W2PPG7 69 aa17.03■□□□□ 0.32
PPP1CA-208ENST00000532446 FCHO1O14526 889 aa17.03■□□□□ 0.32
PPP1CA-208ENST00000532446 TMPRSS11DO60235 418 aa17.03■□□□□ 0.32
PPP1CA-208ENST00000532446 TIAF1O95411 115 aa17.03■□□□□ 0.32
PPP1CA-208ENST00000532446 PCSK2P16519 638 aa17.03■□□□□ 0.32
PPP1CA-208ENST00000532446 ATP4BP51164 291 aa17.03■□□□□ 0.32
PPP1CA-208ENST00000532446 MAPK12P53778 367 aa17.03■□□□□ 0.32
PPP1CA-208ENST00000532446 GABPB1Q06547 395 aaPredicted RBP17.03■□□□□ 0.32
PPP1CA-208ENST00000532446 ZNF763Q0D2J5 394 aa17.03■□□□□ 0.32
PPP1CA-208ENST00000532446 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.03■□□□□ 0.32
PPP1CA-208ENST00000532446 MRM1Q6IN84 353 aaKnown RBP17.03■□□□□ 0.32
PPP1CA-208ENST00000532446 NIPAL1Q6NVV3 410 aa17.03■□□□□ 0.32
PPP1CA-208ENST00000532446 DTWD1Q8N5C7 304 aa17.03■□□□□ 0.32
PPP1CA-208ENST00000532446 CPSF7Q8N684 471 aaKnown RBP17.03■□□□□ 0.32
PPP1CA-208ENST00000532446 OR9A4Q8NGU2 314 aa17.03■□□□□ 0.32
PPP1CA-208ENST00000532446 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.03■□□□□ 0.329e-18■■■□□ 17.2
PPP1CA-208ENST00000532446 MYLK2Q9H1R3 596 aa17.03■□□□□ 0.32
PPP1CA-208ENST00000532446 SLC39A1Q9NY26 324 aa17.03■□□□□ 0.32
PPP1CA-208ENST00000532446 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.03■□□□□ 0.32
PPP1CA-208ENST00000532446 BAIAP2L1Q9UHR4 511 aa17.03■□□□□ 0.32
PPP1CA-208ENST00000532446 SRPK3Q9UPE1 567 aa17.03■□□□□ 0.32
PPP1CA-208ENST00000532446 PCDHB3Q9Y5E6 796 aa17.03■□□□□ 0.32
PPP1CA-208ENST00000532446 A0A0A6YYC8 382 aaPredicted RBP17.02■□□□□ 0.32
PPP1CA-208ENST00000532446 A0A1W2PNU3 283 aaPredicted RBP17.02■□□□□ 0.32
PPP1CA-208ENST00000532446 ARHGAP10A1A4S6 786 aa17.02■□□□□ 0.32
PPP1CA-208ENST00000532446 I3L1I5 382 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms