RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 GBAP04062 536 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 HMGN1P05114 100 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 CD2P06729 351 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 MTHFD1P11586 935 aaKnown RBP10.88□□□□□ -0.67
PTPRK-221ENST00000532331 SLC18A2Q05940 514 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 FCHO2Q0JRZ9 810 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 KLHL26Q53HC5 615 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 LIPJQ5W064 366 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 PARS2Q7L3T8 475 aaKnown RBP10.88□□□□□ -0.67
PTPRK-221ENST00000532331 CDH24Q86UP0 819 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 RASGEF1AQ8N9B8 481 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 CHST4Q8NCG5 386 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 OR10Q1Q8NGQ4 319 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 RPL36Q9Y3U8 105 aaKnown RBP10.88□□□□□ -0.67
PTPRK-221ENST00000532331 TNFRSF10BO14763 440 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 ACADLP28330 430 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 TBPL1P62380 186 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 IRF4Q15306 451 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 CRB2Q5IJ48 1285 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 OLFML2AQ68BL7 652 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 GPR153Q6NV75 609 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 ADGRD2Q7Z7M1 963 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 RTN4RL1Q86UN2 441 aaPredicted RBP10.88□□□□□ -0.67
PTPRK-221ENST00000532331 ASB9Q96DX5 294 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 OR52B2Q96RD2 323 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 MGME1Q9BQP7 344 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 PCDHAC1Q9H158 963 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 TRPV5Q9NQA5 729 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 ENTPD2Q9Y5L3 495 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 FAM240BA0A1B0GVZ2 78 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 SMAD6O43541 496 aaKnown RBP10.88□□□□□ -0.67
PTPRK-221ENST00000532331 CD63P08962 238 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 CSNK1EP49674 416 aaKnown RBP10.88□□□□□ -0.67
PTPRK-221ENST00000532331 GMFBP60983 142 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 GBX1Q14549 363 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 TLR1Q15399 786 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 RNASE12Q5GAN4 147 aaKnown RBP10.88□□□□□ -0.67
PTPRK-221ENST00000532331 PLET1Q6UQ28 207 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 TICAM1Q8IUC6 712 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 ACVR1CQ8NER5 493 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 UFD1Q92890 307 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 SIGLEC10Q96LC7 697 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 SLC39A1Q9NY26 324 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 PISDQ9UG56 409 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 EME2A4GXA9 379 aaPredicted RBP10.88□□□□□ -0.67
PTPRK-221ENST00000532331 GLOD5A6NK44 160 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 DRGXA6NNA5 263 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 CDC40O60508 579 aaKnown RBP eCLIP10.88□□□□□ -0.672e-6■■□□□ 13.2
PTPRK-221ENST00000532331 RBMXL2O75526 392 aaKnown RBP10.88□□□□□ -0.67
PTPRK-221ENST00000532331 P04436 131 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 ROR2Q01974 943 aaKnown RBP10.88□□□□□ -0.67
PTPRK-221ENST00000532331 PSAPL1Q6NUJ1 521 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 ARL14Q8N4G2 192 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 CAPSLQ8WWF8 208 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 FCGR1BQ92637 280 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 LPAR4Q99677 370 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 COPS4Q9BT78 406 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 MBD2Q9UBB5 411 aa10.88□□□□□ -0.67
PTPRK-221ENST00000532331 DAPL1A0PJW8 107 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 TMEM233B4DJY2 109 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 S1PR4O95977 384 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 F11P03951 625 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 HOXD8P13378 290 aaPredicted RBP10.87□□□□□ -0.67
PTPRK-221ENST00000532331 DNAJA1P31689 397 aaKnown RBP10.87□□□□□ -0.67
PTPRK-221ENST00000532331 GRIN2CQ14957 1233 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 IQCCQ4KMZ1 466 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 CAND1Q86VP6 1230 aaKnown RBP10.87□□□□□ -0.67
PTPRK-221ENST00000532331 NAT14Q8WUY8 206 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 FATE1Q969F0 183 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 UHRF1Q96T88 793 aaPredicted RBP10.87□□□□□ -0.67
PTPRK-221ENST00000532331 ASPNQ9BXN1 380 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 OARD1Q9Y530 152 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 GPR37L1O60883 481 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 EGFP01133 1207 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 LINGO3P0C6S8 592 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 XKP51811 444 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 DGKQP52824 942 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 AP3S2P59780 193 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 PLCXD2Q0VAA5 305 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 TMCO6Q96DC7 493 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 GAREM1Q9H706 876 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 FAM120CQ9NX05 1096 aaKnown RBP10.87□□□□□ -0.67
PTPRK-221ENST00000532331 DLGAP4Q9Y2H0 992 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 MYH14Q7Z406 1995 aaKnown RBP10.87□□□□□ -0.67
PTPRK-221ENST00000532331 NPIPA5E9PKD4 350 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 ARPC2O15144 300 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 ABLIM3O94929 683 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 AHSA1O95433 338 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 CXCL10P02778 98 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 GSTM3P21266 225 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 CTHP32929 405 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 ARHGDIBP52566 201 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 TCEAL6Q6IPX3 200 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 GAREM2Q75VX8 874 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 NPWQ8N729 165 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 CLEC1AQ8NC01 280 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 OR6K6Q8NGW6 343 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 KCNK12Q9HB15 430 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 NKIRAS2Q9NYR9 191 aa10.87□□□□□ -0.67
PTPRK-221ENST00000532331 LRIT1Q9P2V4 623 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms