RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 FUT1P19526 365 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 CALRP27797 417 aaKnown RBP2.62□□□□□ -1.99
CD44-234ENST00000531873 CHRNA3P32297 505 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 TNFRSF4P43489 277 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 LINC01547P58512 204 aaPredicted RBP2.62□□□□□ -1.99
CD44-234ENST00000531873 DCDC1P59894 354 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 CSNK2BP67870 215 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 MFGE8Q08431 387 aaPredicted RBP2.62□□□□□ -1.99
CD44-234ENST00000531873 CEACAM7Q14002 265 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 GIT2Q14161 759 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 GRB14Q14449 540 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 RBBP5Q15291 538 aaKnown RBP2.62□□□□□ -1.99
CD44-234ENST00000531873 KRT31Q15323 416 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 SPHARQ15513 63 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 DUSP5Q16690 384 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 KIAA1644Q3SXP7 199 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 ZNF672Q499Z4 452 aaPredicted RBP2.62□□□□□ -1.99
CD44-234ENST00000531873 LRRC37A5PQ49AS3 106 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 ACCSLQ4AC99 568 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 HERC4Q5GLZ8 1057 aaPredicted RBP2.62□□□□□ -1.99
CD44-234ENST00000531873 FAM76BQ5HYJ3 339 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 GALNT17Q6IS24 598 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 KRTAP5-1Q6L8H4 278 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 SLC27A4Q6P1M0 643 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 RBM43Q6ZSC3 357 aaKnown RBP2.62□□□□□ -1.99
CD44-234ENST00000531873 TAF8Q7Z7C8 310 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 ADGRD2Q7Z7M1 963 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 NLRP14Q86W24 1093 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 MARVELD2Q8N4S9 558 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 FAM89BQ8N5H3 189 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 ANKRD20A12PQ8NF67 263 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 TRIM58Q8NG06 486 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 DQX1Q8TE96 717 aaKnown RBP2.62□□□□□ -1.99
CD44-234ENST00000531873 UBTD2Q8WUN7 234 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 SLC35C1Q96A29 364 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 MRPL53Q96EL3 112 aaKnown RBP2.62□□□□□ -1.99
CD44-234ENST00000531873 LMLNQ96KR4 655 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 LURAP1Q96LR2 239 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 NSMCE2Q96MF7 247 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 FAM218AQ96MZ4 157 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 SSX3Q99909 188 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 SPAG8Q99932 426 aaPredicted RBP2.62□□□□□ -1.99
CD44-234ENST00000531873 CCM2Q9BSQ5 444 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 MMP28Q9H239 520 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 FNDC4Q9H6D8 234 aaPredicted RBP2.62□□□□□ -1.99
CD44-234ENST00000531873 ZNF665Q9H7R5 613 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 GPN1Q9HCN4 374 aaPredicted RBP2.62□□□□□ -1.99
CD44-234ENST00000531873 NGBQ9NPG2 151 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 FAM212BQ9NTI7 297 aaPredicted RBP2.62□□□□□ -1.99
CD44-234ENST00000531873 MAN2C1Q9NTJ4 1040 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 RNF186Q9NXI6 227 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.62□□□□□ -1.99
CD44-234ENST00000531873 HACD3Q9P035 362 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 NDUFA13Q9P0J0 144 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 EPHA6Q9UF33 1036 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 NARFQ9UHQ1 456 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 ELF5Q9UKW6 265 aaPredicted RBP2.62□□□□□ -1.99
CD44-234ENST00000531873 BLOC1S6Q9UL45 172 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 EXOC7Q9UPT5 735 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 FAM205AQ6ZU69 1335 aa2.62□□□□□ -1.99
CD44-234ENST00000531873 NOTCH4Q99466 2003 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 DENND3A2RUS2 1198 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 TMEM89A2RUT3 159 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 FAM172BPA6NC97 362 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 SMIM1B2RUZ4 78 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 BMPR1BO00238 502 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 ACOT8O14734 319 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 RASGRF2O14827 1237 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 KLF11O14901 512 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 EPHB6O15197 1021 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 P2RX6O15547 441 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 EXTL3O43909 919 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 FGF17O60258 216 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 SMPD2O60906 423 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 ATP6V1G1O75348 118 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 LRCH4O75427 683 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 KHDRBS3O75525 346 aaKnown RBP2.61□□□□□ -1.99
CD44-234ENST00000531873 TRMUO75648 421 aaKnown RBP2.61□□□□□ -1.99
CD44-234ENST00000531873 CDC123O75794 336 aaPredicted RBP2.61□□□□□ -1.99
CD44-234ENST00000531873 PAK4O96013 591 aaPredicted RBP2.61□□□□□ -1.99
CD44-234ENST00000531873 IFNB1P01574 187 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 EPOP01588 193 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 EDN1P05305 212 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 CD48P09326 243 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 CT45A8P0DMV1 189 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 CT45A9P0DMV2 189 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 SNHG28P0DPA3 235 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 KRT5P13647 590 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 RPL35AP18077 110 aaKnown RBP2.61□□□□□ -1.99
CD44-234ENST00000531873 FCARP24071 287 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 ACKR3P25106 362 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 PRDX6P30041 224 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 TIMP3P35625 211 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 NSFP46459 744 aaKnown RBP2.61□□□□□ -1.99
CD44-234ENST00000531873 CCL11P51671 97 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 KCNK10P57789 538 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 GMFBP60983 142 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 BTG1P62324 171 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 HERV-K104P63124 156 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms