RNA–Protein interactions for RNA: ENST00000531653.5

PSMC3-211, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 498 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-211	ENST00000531653	FPR1	P21462	350 aa		10.37	□□□□□ -0.75
PSMC3-211	ENST00000531653	CNR1	P21554	472 aa		10.37	□□□□□ -0.75
PSMC3-211	ENST00000531653	CETN2	P41208	172 aa		10.37	□□□□□ -0.75
PSMC3-211	ENST00000531653	PTH2R	P49190	550 aa		10.37	□□□□□ -0.75
PSMC3-211	ENST00000531653	CLCN2	P51788	898 aa		10.37	□□□□□ -0.75
PSMC3-211	ENST00000531653	SLC10A1	Q14973	349 aa		10.37	□□□□□ -0.75
PSMC3-211	ENST00000531653	ACKR1	Q16570	336 aa		10.37	□□□□□ -0.75
PSMC3-211	ENST00000531653	ANKRD20A4	Q4UJ75	823 aa		10.37	□□□□□ -0.75
PSMC3-211	ENST00000531653	XKR6	Q5GH73	641 aa		10.37	□□□□□ -0.75
PSMC3-211	ENST00000531653	KIAA0930	Q6ICG6	404 aa	Predicted RBP	10.37	□□□□□ -0.75
PSMC3-211	ENST00000531653	LACC1	Q8IV20	430 aa		10.37	□□□□□ -0.75
PSMC3-211	ENST00000531653	FAM71D	Q8N9W8	422 aa		10.37	□□□□□ -0.75
PSMC3-211	ENST00000531653	KCT2	Q8NC54	265 aa		10.37	□□□□□ -0.75
PSMC3-211	ENST00000531653	THAP11	Q96EK4	314 aa		10.37	□□□□□ -0.75
PSMC3-211	ENST00000531653	MACROD1	Q9BQ69	325 aa		10.37	□□□□□ -0.75
PSMC3-211	ENST00000531653	WDR83	Q9BRX9	315 aa	Known RBP	10.37	□□□□□ -0.75
PSMC3-211	ENST00000531653	P2RY12	Q9H244	342 aa		10.37	□□□□□ -0.75
PSMC3-211	ENST00000531653	ZNF701	Q9NV72	531 aa	Predicted RBP	10.37	□□□□□ -0.75
PSMC3-211	ENST00000531653	NAALAD2	Q9Y3Q0	740 aa		10.37	□□□□□ -0.75
PSMC3-211	ENST00000531653	TRGV5	A0A0B4J1U4	118 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	TRBV11-1	A0A0K0K1C0	115 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	SH3D21	A4FU49	640 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653		A8MVJ9	347 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	DEFB108A	A8MXU0	73 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	AHRR	A9YTQ3	701 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	PRMT5	O14744	637 aa	Predicted RBP	10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	TLX2	O43763	284 aa	Predicted RBP	10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	PSIP1	O75475	530 aa	Known RBP	10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	OR6B1	O95007	311 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	IL18BP	O95998	194 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	PTMA	P06454	111 aa	Known RBP	10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	JAK1	P23458	1154 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	ATP5D	P30049	168 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	PNLIPRP1	P54315	467 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	GDF10	P55107	478 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	WNT3	P56703	355 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	RPS15A	P62244	130 aa	Known RBP	10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	KLF1	Q13351	362 aa	Predicted RBP	10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	AFTPH	Q6ULP2	937 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	UBL4B	Q8N7F7	174 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	GOLM1	Q8NBJ4	401 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	CAMKV	Q8NCB2	501 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	ZNF480	Q8WV37	535 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	HES6	Q96HZ4	224 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	PTCHD1	Q96NR3	888 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	PANX3	Q96QZ0	392 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	TTC1	Q99614	292 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	EBNA1BP2	Q99848	306 aa	Known RBP	10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	FERMT1	Q9BQL6	677 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	ACKR4	Q9NPB9	350 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	SEMA4B	Q9NPR2	832 aa	Predicted RBP	10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	TMEM184C	Q9NVA4	438 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	HPF1	Q9NWY4	346 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	CLDN16	Q9Y5I7	305 aa		10.36	□□□□□ -0.75
PSMC3-211	ENST00000531653	MGAM2	Q2M2H8	2515 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	ATP6AP2	A0A1C7CYW4	349 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	MBD3L3	A6NE82	208 aa	Predicted RBP	10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	ZNF860	A6NHJ4	632 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	MIF4GD	A9UHW6	222 aa	Known RBP	10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653		H7BY64	318 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	HAX1	O00165	279 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	KPNA5	O15131	536 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	GALR3	O60755	368 aa	Predicted RBP	10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	ATP6AP2	O75787	350 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	SLC16A8	O95907	504 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	NID1	P14543	1247 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	RPS3	P23396	243 aa	Known RBP eCLIP	10.35	□□□□□ -0.75	2e-8	■■■■■ 39.2
PSMC3-211	ENST00000531653	HSD17B2	P37059	387 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	SOX3	P41225	446 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	BTG2	P78543	158 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	RUNX1T1	Q06455	604 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	TNK1	Q13470	666 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	ADGRD1	Q6QNK2	874 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	C20orf204	Q6ZNR8	217 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	SYCE1	Q8N0S2	351 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	FBXO15	Q8NCQ5	510 aa	Predicted RBP	10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	OR4L1	Q8NH43	312 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	NEIL3	Q8TAT5	605 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	ZCCHC10	Q8TBK6	192 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	ATG4A	Q8WYN0	398 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	SCYL1	Q96KG9	808 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	CAPZA3	Q96KX2	299 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	FOPNL	Q96NB1	174 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	PRAP1	Q96NZ9	151 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	RASL10B	Q96S79	203 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	PKP4	Q99569	1192 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	CCL19	Q99731	98 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	FAM129A	Q9BZQ8	928 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	ZNF703	Q9H7S9	590 aa	Predicted RBP	10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	NECTIN3	Q9NQS3	549 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	PIH1D1	Q9NWS0	290 aa	Known RBP	10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	ALKBH4	Q9NXW9	302 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	TUBA8	Q9NY65	449 aa	Predicted RBP	10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	SLC2A6	Q9UGQ3	507 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	GUCA1B	Q9UMX6	200 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	ERVK-11	Q9UQG0	969 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	TESMIN	Q9Y4I5	508 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	NIN	Q8N4C6	2090 aa		10.35	□□□□□ -0.75
PSMC3-211	ENST00000531653	MED12L	Q86YW9	2145 aa		10.34	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms