RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 EXOC4Q96A65 974 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 SGF29Q96ES7 293 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 CALML4Q96GE6 196 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 RAD9AQ99638 391 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 RIOK1Q9BRS2 568 aaKnown RBP3.18□□□□□ -1.9
PTPRK-220ENST00000531466 CCDC106Q9BWC9 280 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 OSBPL10Q9BXB5 764 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 TEX12Q9BXU0 123 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 HOXD1Q9GZZ0 328 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 TM9SF3Q9HD45 589 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 PDE7BQ9NP56 450 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 SERINC1Q9NRX5 453 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 ATPIF1Q9UII2 106 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 IKZF3Q9UKT9 509 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 CCPG1Q9ULG6 757 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 PLCL2Q9UPR0 1127 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 ATP6V1DQ9Y5K8 247 aa3.18□□□□□ -1.9
PTPRK-220ENST00000531466 CTAGE15A4D2H0 777 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 TRIM49BA6NDI0 452 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 RSPH10B2B2RC85 870 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 GPR89AB7ZAQ6 455 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 MAGEB3O15480 346 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 NPPAP01160 153 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 ATP5BP06576 529 aaKnown RBP3.17□□□□□ -1.9
PTPRK-220ENST00000531466 RSPH10BP0C881 870 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 GPR89BP0CG08 455 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 HSPA8P11142 646 aaKnown RBP3.17□□□□□ -1.9
PTPRK-220ENST00000531466 IL11P20809 199 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 JAK1P23458 1154 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 MSNP26038 577 aaKnown RBP3.17□□□□□ -1.9
PTPRK-220ENST00000531466 PON1P27169 355 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 CA8P35219 290 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 RFC4P35249 363 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 ARFIP1P53367 373 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 MAP3K7CLP57077 242 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 IRX4P78413 519 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 HTD2P86397 168 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 SGCGQ13326 291 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 DPYSQ14117 519 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 ODF4Q2M2E3 257 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 FBXO48Q5FWF7 155 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 RSBN1Q5VWQ0 802 aaPredicted RBP3.17□□□□□ -1.9
PTPRK-220ENST00000531466 SHQ1Q6PI26 577 aaKnown RBP3.17□□□□□ -1.9
PTPRK-220ENST00000531466 REG3GQ6UW15 175 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 ZYG11AQ6WRX3 759 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 LEKR1Q6ZMV7 388 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 CTAGE6Q86UF2 777 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 CEP57Q86XR8 500 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 PHC2Q8IXK0 858 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 ZC3H3Q8IXZ2 948 aaKnown RBP3.17□□□□□ -1.9
PTPRK-220ENST00000531466 PDCL2Q8N4E4 241 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 SLC4A11Q8NBS3 891 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 GMCL1P1Q8NEA9 526 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 OR56B2PQ8NGI1 322 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 CCDC107Q8WV48 283 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 ANKRD7Q92527 254 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 ATP6V1G3Q96LB4 118 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 FAM218AQ96MZ4 157 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 TMEM237Q96Q45 408 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 TXN2Q99757 166 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 COQ7Q99807 217 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 ATF6BQ99941 703 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 SPXQ9BT56 116 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 YTHDF1Q9BYJ9 559 aaKnown RBP3.17□□□□□ -1.9
PTPRK-220ENST00000531466 NYXQ9GZU5 481 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 MIS12Q9H081 205 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 LSG1Q9H089 658 aaKnown RBP3.17□□□□□ -1.9
PTPRK-220ENST00000531466 WNT5BQ9H1J7 359 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 XKR8Q9H6D3 395 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 CRLF2Q9HC73 371 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 TAS2R3Q9NYW6 316 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 EMC3Q9P0I2 261 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 ACTR3BQ9P1U1 418 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 IL19Q9UHD0 177 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 CLEC4AQ9UMR7 237 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 SLC6A5Q9Y345 797 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 CHTOPQ9Y3Y2 248 aaKnown RBP3.17□□□□□ -1.9
PTPRK-220ENST00000531466 MYO3BQ8WXR4 1341 aa3.17□□□□□ -1.9
PTPRK-220ENST00000531466 NSD2O96028 1365 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 IGLV4-3A0A075B6K6 122 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 LOC100653049A0A140TA62 436 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 FAM220BPB1ANY3 271 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 G3V2L1 256 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 H0YIV9 168 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 K7EPI3 171 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 NDUFS8O00217 210 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 BUB1O43683 1085 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 CYTH3O43739 400 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 FMO6PO60774 539 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 CEACAM4O75871 244 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 KRT34O76011 436 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 LY6G6DO95868 133 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 OLFM2O95897 454 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 PNPP00491 289 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 ADRB2P07550 413 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 ZFYP08048 801 aaPredicted RBP3.16□□□□□ -1.9
PTPRK-220ENST00000531466 CLTBP09497 229 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 MGMTP16455 207 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 GABRB1P18505 474 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 ADSSP30520 456 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms