RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 TRIM45Q9H8W5 580 aaPredicted RBP8.61□□□□□ -1.03
NEDD8-206ENST00000531430 PRDM9Q9NQV7 894 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 INTS10Q9NVR2 710 aaKnown RBP8.61□□□□□ -1.03
NEDD8-206ENST00000531430 ZNF358Q9NW07 568 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 ADAMTS6Q9UKP5 1117 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 SOX13Q9UN79 622 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 DHRS7Q9Y394 339 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 L3MBTL1Q9Y468 752 aa8.61□□□□□ -1.03
NEDD8-206ENST00000531430 A0A0G2JNJ9 132 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 TCRBV7S3A2A0A539 114 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 FIGNL2A6NMB9 653 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 BCKDKO14874 412 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 OR2J2O76002 312 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 IFNA16P05015 189 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 RNH1P13489 461 aaKnown RBP8.6□□□□□ -1.03
NEDD8-206ENST00000531430 NPPBP16860 134 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 TNNI3P19429 210 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 SKIV2L2P42285 1042 aaKnown RBP8.6□□□□□ -1.03
NEDD8-206ENST00000531430 MAN2A2P49641 1150 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 RGS4P49798 205 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 ADARP55265 1226 aaKnown RBP8.6□□□□□ -1.03
NEDD8-206ENST00000531430 ADAM8P78325 824 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 BTN3A2P78410 334 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 KEAP1Q14145 624 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 CSHL1Q14406 222 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 SLC10A1Q14973 349 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 SKOR2Q2VWA4 1001 aaPredicted RBP8.6□□□□□ -1.03
NEDD8-206ENST00000531430 CATSPEREQ5SY80 951 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 WLSQ5T9L3 541 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 KIAA0930Q6ICG6 404 aaPredicted RBP8.6□□□□□ -1.03
NEDD8-206ENST00000531430 ZNF549Q6P9A3 640 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 CDC20BQ86Y33 519 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 PSD4Q8NDX1 1056 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 NFAM1Q8NET5 270 aaPredicted RBP8.6□□□□□ -1.03
NEDD8-206ENST00000531430 B3GNT7Q8NFL0 401 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 OR2M7Q8NG81 312 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 EEF1AKMT1Q8WVE0 214 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 SLCO2A1Q92959 643 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 NCLNQ969V3 563 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 SNF8Q96H20 258 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 PDLIM2Q96JY6 352 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 HAUS8Q9BT25 410 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 CNPPD1Q9BV87 410 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 FAM129AQ9BZQ8 928 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 KLHL31Q9H511 634 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 PARVBQ9HBI1 364 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 DEPPQ9NTK1 212 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 C20orf96Q9NUD7 363 aaPredicted RBP8.6□□□□□ -1.03
NEDD8-206ENST00000531430 CRIM1Q9NZV1 1036 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 Q9UFV3 132 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 TRMT6Q9UJA5 497 aaKnown RBP8.6□□□□□ -1.03
NEDD8-206ENST00000531430 PDE10AQ9Y233 779 aa8.6□□□□□ -1.03
NEDD8-206ENST00000531430 YARS2Q9Y2Z4 477 aaKnown RBP8.6□□□□□ -1.03
NEDD8-206ENST00000531430 A0A0G2JN53 185 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 TCRBV16S1A1N1A0A5B0 115 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 URADA6NGE7 173 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 GOLGA8MH3BSY2 632 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 HAUS5O94927 633 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 OR6B1O95007 311 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 GUCA1CO95843 209 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 FOSL1P15407 271 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 CNR1P21554 472 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 CCND1P24385 295 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 PPP2R1BP30154 601 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 ADH7P40394 386 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 MAGEA5P43359 124 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 SLC13A2Q13183 592 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 PWP1Q13610 501 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 CCNG2Q16589 344 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 PHKG1Q16816 387 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 XKR6Q5GH73 641 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 TOR1AIP1Q5JTV8 583 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 C1orf185Q5T7R7 199 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 TMEM198Q66K66 360 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 UGT3A1Q6NUS8 523 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 NIPAL1Q6NVV3 410 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 LCTLQ6UWM7 567 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 CLEC9AQ6UXN8 241 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 C4orf22Q6V702 233 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 QSOX2Q6ZRP7 698 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 FAM47EQ6ZV65 393 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 CHSY3Q70JA7 882 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 CLNKQ7Z7G1 428 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 MYO1HQ8N1T3 1032 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 AFAP1L2Q8N4X5 818 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 LRRN4CLQ8ND94 238 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 CD200R1Q8TD46 325 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 UTP15Q8TED0 518 aaKnown RBP8.59□□□□□ -1.03
NEDD8-206ENST00000531430 CCT6BQ92526 530 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 VMP1Q96GC9 406 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 HES6Q96HZ4 224 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 FAR2Q96K12 515 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 TSNARE1Q96NA8 513 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 NDNQ99608 321 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 DESI2Q9BSY9 194 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 TRIM54Q9BYV2 358 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 ZNF395Q9H8N7 513 aaPredicted RBP8.59□□□□□ -1.03
NEDD8-206ENST00000531430 EIF2B3Q9NR50 452 aaKnown RBP8.59□□□□□ -1.03
NEDD8-206ENST00000531430 PRTFDC1Q9NRG1 225 aa8.59□□□□□ -1.03
NEDD8-206ENST00000531430 RASSF1Q9NS23 344 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms