RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 ADNP2Q6IQ32 1131 aa14.49□□□□□ -0.09
CCS-206ENST00000530961 INO80CQ6PI98 192 aaPredicted RBP14.49□□□□□ -0.09
CCS-206ENST00000530961 DTWD1Q8N5C7 304 aa14.49□□□□□ -0.09
CCS-206ENST00000530961 AMER3Q8N944 861 aa14.49□□□□□ -0.09
CCS-206ENST00000530961 METTL6Q8TCB7 284 aa14.49□□□□□ -0.09
CCS-206ENST00000530961 AGAP11Q8TF27 550 aa14.49□□□□□ -0.09
CCS-206ENST00000530961 SNRNP27Q8WVK2 155 aaKnown RBP14.49□□□□□ -0.09
CCS-206ENST00000530961 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.49□□□□□ -0.09
CCS-206ENST00000530961 STARD8Q92502 1023 aa14.49□□□□□ -0.09
CCS-206ENST00000530961 NACC2Q96BF6 587 aa14.49□□□□□ -0.09
CCS-206ENST00000530961 ARL8AQ96BM9 186 aa14.49□□□□□ -0.09
CCS-206ENST00000530961 ATP6V1G3Q96LB4 118 aa14.49□□□□□ -0.09
CCS-206ENST00000530961 KCNC2Q96PR1 638 aa14.49□□□□□ -0.09
CCS-206ENST00000530961 F2RL3Q96RI0 385 aa14.49□□□□□ -0.09
CCS-206ENST00000530961 MTERF1Q99551 399 aaKnown RBP14.49□□□□□ -0.09
CCS-206ENST00000530961 TBCDQ9BTW9 1192 aa14.49□□□□□ -0.09
CCS-206ENST00000530961 MECRQ9BV79 373 aa14.49□□□□□ -0.09
CCS-206ENST00000530961 TGIF2Q9GZN2 237 aa14.49□□□□□ -0.09
CCS-206ENST00000530961 ROGDIQ9GZN7 287 aa14.49□□□□□ -0.09
CCS-206ENST00000530961 ACTL8Q9H568 366 aa14.49□□□□□ -0.09
CCS-206ENST00000530961 EML4Q9HC35 981 aaKnown RBP14.49□□□□□ -0.09
CCS-206ENST00000530961 MID1IP1Q9NPA3 183 aa14.49□□□□□ -0.09
CCS-206ENST00000530961 TRPC4Q9UBN4 977 aa14.49□□□□□ -0.09
CCS-206ENST00000530961 COL6A6A6NMZ7 2263 aa14.48□□□□□ -0.09
CCS-206ENST00000530961 A0A1B0GTL3 188 aa14.48□□□□□ -0.09
CCS-206ENST00000530961 MAGEB17A8MXT2 336 aa14.48□□□□□ -0.09
CCS-206ENST00000530961 FFAR3O14843 346 aa14.48□□□□□ -0.09
CCS-206ENST00000530961 GPR42O15529 346 aa14.48□□□□□ -0.09
CCS-206ENST00000530961 ULK1O75385 1050 aa14.48□□□□□ -0.09
CCS-206ENST00000530961 TSFMP43897 325 aaKnown RBP14.48□□□□□ -0.09
CCS-206ENST00000530961 NEK2P51955 445 aa14.48□□□□□ -0.09
CCS-206ENST00000530961 PLA2G16P53816 162 aa14.48□□□□□ -0.09
CCS-206ENST00000530961 RPS13P62277 151 aaKnown RBP14.48□□□□□ -0.09
CCS-206ENST00000530961 SNRPNP63162 240 aaKnown RBP14.48□□□□□ -0.09
CCS-206ENST00000530961 BTN3A2P78410 334 aa14.48□□□□□ -0.09
CCS-206ENST00000530961 DDX39BQ13838 428 aaKnown RBP14.48□□□□□ -0.09
CCS-206ENST00000530961 SSPNQ14714 243 aa14.48□□□□□ -0.09
CCS-206ENST00000530961 SLC9A5Q14940 896 aa14.48□□□□□ -0.09
CCS-206ENST00000530961 ABHD17CQ6PCB6 329 aa14.48□□□□□ -0.09
CCS-206ENST00000530961 PRSS41Q7RTY9 318 aa14.48□□□□□ -0.09
CCS-206ENST00000530961 PDSS2Q86YH6 399 aa14.48□□□□□ -0.09
CCS-206ENST00000530961 CDYL2Q8N8U2 506 aa14.48□□□□□ -0.09
CCS-206ENST00000530961 OR2Y1Q8NGV0 311 aa14.48□□□□□ -0.09
CCS-206ENST00000530961 STT3BQ8TCJ2 826 aa14.48□□□□□ -0.09
CCS-206ENST00000530961 SELENOMQ8WWX9 145 aa14.48□□□□□ -0.09
CCS-206ENST00000530961 MIEF2Q96C03 454 aa14.48□□□□□ -0.09
CCS-206ENST00000530961 SERPINI1Q99574 410 aa14.48□□□□□ -0.09
CCS-206ENST00000530961 YIPF2Q9BWQ6 316 aa14.48□□□□□ -0.09
CCS-206ENST00000530961 NPLQ9BXD5 320 aaPredicted RBP14.48□□□□□ -0.09
CCS-206ENST00000530961 AICDAQ9GZX7 198 aa14.48□□□□□ -0.09
CCS-206ENST00000530961 BRF2Q9HAW0 419 aa14.48□□□□□ -0.09
CCS-206ENST00000530961 C14orf105Q9NVL8 296 aa14.48□□□□□ -0.09
CCS-206ENST00000530961 NMRK1Q9NWW6 199 aa14.48□□□□□ -0.09
CCS-206ENST00000530961 NKIRAS1Q9NYS0 192 aa14.48□□□□□ -0.09
CCS-206ENST00000530961 PTRH2Q9Y3E5 179 aaKnown RBP14.48□□□□□ -0.09
CCS-206ENST00000530961 ABCA12Q86UK0 2595 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 DOPEY1Q5JWR5 2465 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 ENO4A6NNW6 628 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 HMGB1P1B2RPK0 211 aaPredicted RBP14.47□□□□□ -0.09
CCS-206ENST00000530961 B8ZZF3 427 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 UBFD1O14562 309 aaKnown RBP14.47□□□□□ -0.09
CCS-206ENST00000530961 B3GALT2O43825 422 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 CRCPO75575 148 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 SEMA3DO95025 777 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 ZGLP1P0C6A0 271 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 HSD3B1P14060 373 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 WT1P19544 449 aaPredicted RBP14.47□□□□□ -0.09
CCS-206ENST00000530961 HSD3B2P26439 372 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 HMOX2P30519 316 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 FOLR3P41439 243 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 MTTPP55157 894 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 AP5B1Q2VPB7 878 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 HHATQ5VTY9 493 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 OR6Y1Q8NGX8 325 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 OR51Q1Q8NH59 317 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 PPP1R14CQ8TAE6 165 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 RGMAQ96B86 450 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 MTFMTQ96DP5 389 aaKnown RBP14.47□□□□□ -0.09
CCS-206ENST00000530961 OR1F2PQ96R84 312 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 SERINC2Q96SA4 455 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 SPSB2Q99619 263 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 OR51B5Q9H339 312 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 PRDM7Q9NQW5 492 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 AHSPQ9NZD4 102 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 CTSFQ9UBX1 484 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 MRPS18BQ9Y676 258 aaKnown RBP14.47□□□□□ -0.09
CCS-206ENST00000530961 COL12A1Q99715 3063 aa14.47□□□□□ -0.09
CCS-206ENST00000530961 NOTCH2Q04721 2471 aa14.46□□□□□ -0.09
CCS-206ENST00000530961 MANBAO00462 879 aa14.46□□□□□ -0.09
CCS-206ENST00000530961 NKX2-8O15522 239 aa14.46□□□□□ -0.09
CCS-206ENST00000530961 CHST10O43529 356 aa14.46□□□□□ -0.09
CCS-206ENST00000530961 CNOT3O75175 753 aaKnown RBP14.46□□□□□ -0.09
CCS-206ENST00000530961 RDH16O75452 317 aa14.46□□□□□ -0.09
CCS-206ENST00000530961 SASH3O75995 380 aa14.46□□□□□ -0.09
CCS-206ENST00000530961 SNUPNO95149 360 aaKnown RBP14.46□□□□□ -0.09
CCS-206ENST00000530961 BMP10O95393 424 aa14.46□□□□□ -0.09
CCS-206ENST00000530961 IGHEP01854 428 aa14.46□□□□□ -0.09
CCS-206ENST00000530961 CYC1P08574 325 aa14.46□□□□□ -0.09
CCS-206ENST00000530961 FGF4P08620 206 aa14.46□□□□□ -0.09
CCS-206ENST00000530961 ATXN8OSP0DMR3 200 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms