RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 CCNG1P51959 295 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 PLA2G16P53816 162 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 PRKAA2P54646 552 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 CDH13P55290 713 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 HERVK_113P63132 956 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 SLC18A2Q05940 514 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 TGM3Q08188 693 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 C19orf57Q0VDD7 668 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 NFATC3Q12968 1075 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 RUNX2Q13950 521 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 TMEM35AQ53FP2 167 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 UNC50Q53HI1 259 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 ZNF678Q5SXM1 525 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 DEPDC1Q5TB30 811 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 MFSD4BQ5TF39 518 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 CHSY3Q70JA7 882 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 RPS27LQ71UM5 84 aaKnown RBP11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 NDUFAF7Q7L592 441 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 UBE3DQ7Z6J8 389 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 SLC22A9Q8IVM8 553 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 CA13Q8N1Q1 262 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 GALNT16Q8N428 558 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 SRFBP1Q8NEF9 429 aaKnown RBP11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 OR52B6Q8NGF0 335 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 HUS1BQ8NHY5 278 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 METTL21AQ8WXB1 218 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 REPS1Q96D71 796 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 CMTM7Q96FZ5 175 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 CDK15Q96Q40 435 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 TMEM109Q9BVC6 243 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 NUDT9Q9BW91 350 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 ERVK-6Q9BXR3 956 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 SEMA4BQ9NPR2 832 aaPredicted RBP11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 PSD3Q9NYI0 1048 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 LGALS13Q9UHV8 139 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 GRID1Q9ULK0 1009 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 PLAAQ9Y263 795 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 TP53TG5Q9Y2B4 290 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 COL6A6A6NMZ7 2263 aa11.95□□□□□ -0.5
CCDC90B-216ENST00000529856 IGHV1-45A0A0A0MS14 117 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 NSG1A0A0A6YYJ2 146 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 B8ZZF3 427 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 G3V2L1 256 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 PPP6CO00743 305 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 COPEO14579 308 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 B3GALT2O43825 422 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 PLIN3O60664 434 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 CDC123O75794 336 aaPredicted RBP11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 OTCP00480 354 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 PROCP04070 461 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 PDGFAP04085 211 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 RNH1P13489 461 aaKnown RBP11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 NR1D1P20393 614 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 JAK1P23458 1154 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 PTX3P26022 381 aaPredicted RBP11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 PGDP52209 483 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 MTTPP55157 894 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 RHAGQ02094 409 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 CLCQ05315 142 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 Q0VFX4 171 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 TRAF3Q13114 568 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 DDX39BQ13838 428 aaKnown RBP11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 MYBPC3Q14896 1274 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 PCOLCEQ15113 449 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 ZRSR2Q15696 482 aaKnown RBP11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 CCDC153Q494R4 210 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 KHDRBS2Q5VWX1 349 aaKnown RBP11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 ASB18Q6ZVZ8 466 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 CPEB2Q7Z5Q1 589 aaKnown RBP11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 MILR1Q7Z6M3 343 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 TRABD2AQ86V40 505 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 C4orf33Q8N1A6 199 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 RNF175Q8N4F7 328 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 OR4F6Q8NGB9 312 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 WDR20Q8TBZ3 569 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 KCNC2Q96PR1 638 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 SERINC2Q96SA4 455 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 MTERF1Q99551 399 aaKnown RBP11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 SMAD5Q99717 465 aaKnown RBP11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 TBCDQ9BTW9 1192 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 RBCK1Q9BYM8 510 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 ROGDIQ9GZN7 287 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 ZNF700Q9H0M5 742 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 OR51B5Q9H339 312 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 ZNF160Q9HCG1 818 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 DMRT3Q9NQL9 472 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 GPR83Q9NYM4 423 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 G3BP2Q9UN86 482 aaKnown RBP11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 PCDHGB7Q9Y5F8 929 aa11.94□□□□□ -0.5
CCDC90B-216ENST00000529856 TNRC6AQ8NDV7 1962 aaKnown RBP11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 A0A1B0GTL3 188 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 MAGEB17A8MXT2 336 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 FAM227AF5H4B4 570 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 PSMD12O00232 456 aaPredicted RBP11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 FOXE1O00358 373 aaPredicted RBP11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 KLHL41O60662 606 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 B4GALT2O60909 372 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 SH3BGRLO75368 114 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 SUPT7LO94864 414 aa11.93□□□□□ -0.5
CCDC90B-216ENST00000529856 MYL2P10916 166 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms