RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 SGSM1Q2NKQ1 1148 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 GAGE2EQ4V326 116 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 EOGTQ5NDL2 527 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 HECTD3Q5T447 861 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 SDHAF4Q5VUM1 108 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 GAGE2AQ6NT46 116 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 PAQR9Q6ZVX9 377 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 ODF3L1Q8IXM7 274 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 RFLNBQ8N5W9 214 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 CCDC89Q8N998 374 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 HMGCLL1Q8TB92 370 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 SNX21Q969T3 373 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 MYLPFQ96A32 169 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 FEM1CQ96JP0 617 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 UBXN6Q9BZV1 441 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 CSTL1Q9H114 145 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 FBXO44Q9H4M3 255 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 TRPC7Q9HCX4 862 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 GAGE2DQ9UEU5 116 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 CFAP45Q9UL16 551 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 TRAF3IP3Q9Y228 551 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 KLHL20Q9Y2M5 609 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 WBP11Q9Y2W2 641 aaKnown RBP4.48□□□□□ -1.69
CSDE1-212ENST00000529046 NME7Q9Y5B8 376 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 CPQQ9Y646 472 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.48□□□□□ -1.69
CSDE1-212ENST00000529046 GREB1Q4ZG55 1949 aa4.48□□□□□ -1.69
CSDE1-212ENST00000529046 A0A0G2JPF8 293 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 ZCWPW2A0A1B0GU75 182 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 C5orf60A6NFR6 353 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 HNRNPCL2B2RXH8 293 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 HNRNPCL3B7ZW38 293 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 H0Y626 953 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 AP5Z1O43299 807 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 COCHO43405 550 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 PLPP2O43688 288 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 CACNG3O60359 315 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 ZNF432O94892 652 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 TRIM16O95361 564 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 PROS1P07225 676 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 HNRNPCL4P0DMR1 293 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 DLATP10515 647 aaKnown RBP4.47□□□□□ -1.69
CSDE1-212ENST00000529046 NR2F1P10589 423 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 GM2AP17900 193 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 TRIM21P19474 475 aaKnown RBP4.47□□□□□ -1.69
CSDE1-212ENST00000529046 GTF2H1P32780 548 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 CTSCP53634 463 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 MFAP4P55083 255 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 MYL6P60660 151 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 TNNC1P63316 161 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 ASIC1P78348 528 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 EEF1A2Q05639 463 aaKnown RBP4.47□□□□□ -1.69
CSDE1-212ENST00000529046 INCA1Q0VD86 236 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 ENPP2Q13822 863 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 STK38Q15208 465 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 MDH1BQ5I0G3 518 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 RESP18Q5W5W9 173 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 WBP2NLQ6ICG8 309 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 FAM173BQ6P4H8 233 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 ZNF534Q76KX8 674 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 LPCAT2Q7L5N7 544 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 GPR180Q86V85 440 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 KMT5CQ86Y97 462 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.47□□□□□ -1.693e-6■■■■■ 69.6
CSDE1-212ENST00000529046 SLC44A1Q8WWI5 657 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 SMARCD1Q96GM5 515 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 NUDCD1Q96RS6 583 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 HNRNPABQ99729 332 aaKnown RBP4.47□□□□□ -1.69
CSDE1-212ENST00000529046 MRPL45Q9BRJ2 306 aaKnown RBP4.47□□□□□ -1.69
CSDE1-212ENST00000529046 EDEM2Q9BV94 578 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 TEX12Q9BXU0 123 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 MAK16Q9BXY0 300 aaKnown RBP4.47□□□□□ -1.69
CSDE1-212ENST00000529046 PANK2Q9BZ23 570 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 PPIL3Q9H2H8 161 aaKnown RBP4.47□□□□□ -1.69
CSDE1-212ENST00000529046 HRH4Q9H3N8 390 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 CYP3A43Q9HB55 503 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 DMAP1Q9NPF5 467 aaPredicted RBP4.47□□□□□ -1.69
CSDE1-212ENST00000529046 TMEM9BQ9NQ34 198 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 SPHK2Q9NRA0 654 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 RCC2Q9P258 522 aaKnown RBP4.47□□□□□ -1.69
CSDE1-212ENST00000529046 WDR35Q9P2L0 1181 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 DEC1Q9P2X7 70 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 KCNG2Q9UJ96 466 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 SCML2Q9UQR0 700 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 ZNF510Q9Y2H8 683 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 SNX8Q9Y5X2 465 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 OBSL1O75147 1896 aa4.47□□□□□ -1.69
CSDE1-212ENST00000529046 EPG5Q9HCE0 2579 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 LRRIQ3A6PVS8 624 aaPredicted RBP4.46□□□□□ -1.7
CSDE1-212ENST00000529046 HHLA1C9JL84 531 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 SGK1O00141 431 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 POLR2DO15514 142 aaKnown RBP4.46□□□□□ -1.7
CSDE1-212ENST00000529046 HCRTO43612 131 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 KLRC4O43908 158 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 GPC4O75487 556 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 ASS1P00966 412 aaKnown RBP4.46□□□□□ -1.7
CSDE1-212ENST00000529046 IGKV3-20P01619 116 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 IGLV3-19P01714 112 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 SERPINF2P08697 491 aa4.46□□□□□ -1.7
CSDE1-212ENST00000529046 FAM106CPP0CH98 169 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms