RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 UGDHO60701 494 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 B4GALT2O60909 372 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 CDC123O75794 336 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 SEC24DO94855 1032 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 SNRPAP09012 282 aaKnown RBP11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 RHOXF2BP0C7M4 288 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 GFAPP14136 432 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 GLRBP48167 497 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 PIK3CGP48736 1102 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 ACTN3Q08043 901 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 TLR1Q15399 786 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 PFKFB4Q16877 469 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 SFT2D3Q587I9 215 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 TECRLQ5HYJ1 363 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 LIPJQ5W064 366 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 B3GNTL1Q67FW5 361 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 H3F3CQ6NXT2 135 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 MED27Q6P2C8 311 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 TRIM40Q6P9F5 258 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 ABHD17CQ6PCB6 329 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 ADGRD1Q6QNK2 874 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 TIFABQ6ZNK6 161 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 LINC00696Q6ZRV3 163 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 CUZD1Q86UP6 607 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 PLD6Q8N2A8 252 aaKnown RBP11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 ADAMTS18Q8TE60 1221 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 ZNF473Q8WTR7 871 aaKnown RBP11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 CCT6BQ92526 530 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 MTBPQ96DY7 904 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 PTCHD1Q96NR3 888 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 SERINC2Q96SA4 455 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 RHOXF2Q9BQY4 288 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 ROGDIQ9GZN7 287 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 RNF32Q9H0A6 362 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 L2HGDHQ9H9P8 463 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 MMP25Q9NPA2 562 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 PRDM9Q9NQV7 894 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 LUZP4Q9P127 313 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 PTGFRNQ9P2B2 879 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 FETUBQ9UGM5 382 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 TEKT2Q9UIF3 430 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 MMACHCQ9Y4U1 282 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 ANGPTL3Q9Y5C1 460 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 PCDHGA10Q9Y5H3 936 aa11.39□□□□□ -0.59
TRAPPC4-209ENST00000528230 IGHV3-20A0A0C4DH32 117 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 DYTNA2CJ06 578 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 SYNDIG1LA6NDD5 238 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 TRIM49D1C9J1S8 452 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 STX16-NPEPL1H3BU86 382 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 CDK2AP1O14519 115 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 STX16O14662 325 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 RIPK2O43353 540 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 B3GALT2O43825 422 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 CELA2AP08217 269 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 ITGAMP11215 1152 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 TSFMP43897 325 aaKnown RBP11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 ARFIP1P53367 373 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 MTTPP55157 894 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 HSD17B7P56937 341 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 RAB38P57729 211 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 OR4D2P58180 307 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 RUNX2Q13950 521 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 RCN2Q14257 317 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 ZNF169Q14929 603 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 BTBD16Q32M84 506 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 TMEM35AQ53FP2 167 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 GRHL2Q6ISB3 625 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 RPUSD3Q6P087 351 aaKnown RBP11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 PAPD4Q6PIY7 484 aaKnown RBP11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 CHSY3Q70JA7 882 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 SIRT6Q8N6T7 355 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 TEX9Q8N6V9 391 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 ARMC2Q8NEN0 867 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 OR7G3Q8NG95 312 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 UHMK1Q8TAS1 419 aaKnown RBP11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 SNRNP40Q96DI7 357 aaKnown RBP11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 ZNF354BQ96LW1 612 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 BARD1Q99728 777 aaKnown RBP11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 TBCDQ9BTW9 1192 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 MS4A8Q9BY19 250 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 RBCK1Q9BYM8 510 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 TXLNGYQ9BZA5 131 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 SLC29A3Q9BZD2 475 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 PRDM7Q9NQW5 492 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 PSD3Q9NYI0 1048 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 STMN3Q9NZ72 180 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 PCDHGA11Q9Y5H2 935 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 CSAG2Q9Y5P2 127 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 COPG1Q9Y678 874 aaKnown RBP11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 NBASA2RRP1 2371 aa11.38□□□□□ -0.59
TRAPPC4-209ENST00000528230 IGKV3D-11A0A0A0MRZ8 115 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 TCRBV16S1A1N1A0A5B0 115 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 CLEC18AA5D8T8 446 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 FAM227AF5H4B4 570 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 H0YIV9 168 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 E2F3O00716 465 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 CLDN4O14493 209 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 ZIC2O95409 532 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 FAM153BP0C7A2 387 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 MYBL2P10244 700 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms