RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 TSNAXIP1Q2TAA8 658 aa24.8■■□□□ 1.56
TSPAN4-217ENST00000527644 PLAG1Q6DJT9 500 aa24.8■■□□□ 1.56
TSPAN4-217ENST00000527644 ADNP2Q6IQ32 1131 aa24.8■■□□□ 1.56
TSPAN4-217ENST00000527644 METTL2BQ6P1Q9 378 aaKnown RBP24.8■■□□□ 1.56
TSPAN4-217ENST00000527644 TRIM40Q6P9F5 258 aa24.8■■□□□ 1.56
TSPAN4-217ENST00000527644 QSOX2Q6ZRP7 698 aa24.8■■□□□ 1.56
TSPAN4-217ENST00000527644 LRRN4CLQ8ND94 238 aa24.8■■□□□ 1.56
TSPAN4-217ENST00000527644 DNAJB14Q8TBM8 379 aa24.8■■□□□ 1.56
TSPAN4-217ENST00000527644 TSLPQ969D9 159 aa24.8■■□□□ 1.56
TSPAN4-217ENST00000527644 ZNF358Q9NW07 568 aa24.8■■□□□ 1.56
TSPAN4-217ENST00000527644 CPSF2Q9P2I0 782 aaKnown RBP24.8■■□□□ 1.56
TSPAN4-217ENST00000527644 RP1L1Q8IWN7 2480 aaPredicted RBP24.79■■□□□ 1.56
TSPAN4-217ENST00000527644 PRMT3O60678 531 aa24.79■■□□□ 1.56
TSPAN4-217ENST00000527644 FAM153BP0C7A2 387 aa24.79■■□□□ 1.56
TSPAN4-217ENST00000527644 ITGAMP11215 1152 aa24.79■■□□□ 1.56
TSPAN4-217ENST00000527644 PLA2G16P53816 162 aa24.79■■□□□ 1.56
TSPAN4-217ENST00000527644 ACTN3Q08043 901 aaPredicted RBP24.79■■□□□ 1.56
TSPAN4-217ENST00000527644 TGM3Q08188 693 aa24.79■■□□□ 1.56
TSPAN4-217ENST00000527644 FAM153CQ494X1 144 aa24.79■■□□□ 1.56
TSPAN4-217ENST00000527644 SFT2D3Q587I9 215 aa24.79■■□□□ 1.56
TSPAN4-217ENST00000527644 MED27Q6P2C8 311 aa24.79■■□□□ 1.56
TSPAN4-217ENST00000527644 LAS2Q8IYD9 372 aa24.79■■□□□ 1.56
TSPAN4-217ENST00000527644 SIRT6Q8N6T7 355 aa24.79■■□□□ 1.56
TSPAN4-217ENST00000527644 EIF1ADQ8N9N8 165 aaKnown RBP24.79■■□□□ 1.56
TSPAN4-217ENST00000527644 PTCHD1Q96NR3 888 aa24.79■■□□□ 1.56
TSPAN4-217ENST00000527644 QRFPRQ96P65 431 aa24.79■■□□□ 1.56
TSPAN4-217ENST00000527644 TXLNGYQ9BZA5 131 aa24.79■■□□□ 1.56
TSPAN4-217ENST00000527644 TMCO1Q9UM00 188 aa24.79■■□□□ 1.56
TSPAN4-217ENST00000527644 A0A0G2JN53 185 aa24.78■■□□□ 1.56
TSPAN4-217ENST00000527644 B3GALT2O43825 422 aa24.78■■□□□ 1.56
TSPAN4-217ENST00000527644 ZIC2O95409 532 aaPredicted RBP24.78■■□□□ 1.56
TSPAN4-217ENST00000527644 UQCRHP07919 91 aa24.78■■□□□ 1.56
TSPAN4-217ENST00000527644 SERPINB1P30740 379 aa24.78■■□□□ 1.56
TSPAN4-217ENST00000527644 RUNX2Q13950 521 aa24.78■■□□□ 1.56
TSPAN4-217ENST00000527644 EXT1Q16394 746 aa24.78■■□□□ 1.56
TSPAN4-217ENST00000527644 BTBD16Q32M84 506 aa24.78■■□□□ 1.56
TSPAN4-217ENST00000527644 GRHL2Q6ISB3 625 aa24.78■■□□□ 1.56
TSPAN4-217ENST00000527644 ABHD17CQ6PCB6 329 aa24.78■■□□□ 1.56
TSPAN4-217ENST00000527644 ADGRD1Q6QNK2 874 aa24.78■■□□□ 1.56
TSPAN4-217ENST00000527644 CUZD1Q86UP6 607 aa24.78■■□□□ 1.56
TSPAN4-217ENST00000527644 SRFBP1Q8NEF9 429 aaKnown RBP24.78■■□□□ 1.56
TSPAN4-217ENST00000527644 M1APQ8TC57 530 aa24.78■■□□□ 1.56
TSPAN4-217ENST00000527644 ZNF473Q8WTR7 871 aaKnown RBP24.78■■□□□ 1.56
TSPAN4-217ENST00000527644 MTBPQ96DY7 904 aa24.78■■□□□ 1.56
TSPAN4-217ENST00000527644 LPAR4Q99677 370 aa24.78■■□□□ 1.56
TSPAN4-217ENST00000527644 PRDM9Q9NQV7 894 aa24.78■■□□□ 1.56
TSPAN4-217ENST00000527644 ADGRE2Q9UHX3 823 aa24.78■■□□□ 1.56
TSPAN4-217ENST00000527644 CSAG2Q9Y5P2 127 aa24.78■■□□□ 1.56
TSPAN4-217ENST00000527644 VPS4BO75351 444 aa24.77■■□□□ 1.56
TSPAN4-217ENST00000527644 GCAP28676 217 aa24.77■■□□□ 1.56
TSPAN4-217ENST00000527644 PIK3CGP48736 1102 aa24.77■■□□□ 1.56
TSPAN4-217ENST00000527644 OR4D2P58180 307 aa24.77■■□□□ 1.56
TSPAN4-217ENST00000527644 BTG2P78543 158 aa24.77■■□□□ 1.56
TSPAN4-217ENST00000527644 TLR1Q15399 786 aa24.77■■□□□ 1.56
TSPAN4-217ENST00000527644 PRR30Q53SZ7 412 aaPredicted RBP24.77■■□□□ 1.56
TSPAN4-217ENST00000527644 LIPJQ5W064 366 aa24.77■■□□□ 1.56
TSPAN4-217ENST00000527644 PAPD4Q6PIY7 484 aaKnown RBP24.77■■□□□ 1.56
TSPAN4-217ENST00000527644 TIFABQ6ZNK6 161 aa24.77■■□□□ 1.56
TSPAN4-217ENST00000527644 GALNT11Q8NCW6 608 aa24.77■■□□□ 1.56
TSPAN4-217ENST00000527644 OR7G3Q8NG95 312 aa24.77■■□□□ 1.56
TSPAN4-217ENST00000527644 SCYL1Q96KG9 808 aa24.77■■□□□ 1.56
TSPAN4-217ENST00000527644 F2RL3Q96RI0 385 aa24.77■■□□□ 1.56
TSPAN4-217ENST00000527644 SERINC2Q96SA4 455 aa24.77■■□□□ 1.56
TSPAN4-217ENST00000527644 VPS4AQ9UN37 437 aa24.77■■□□□ 1.56
TSPAN4-217ENST00000527644 PCDHGA10Q9Y5H3 936 aa24.77■■□□□ 1.56
TSPAN4-217ENST00000527644 SCN2AQ99250 2005 aa24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 FLNCQ14315 2725 aa24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 DYTNA2CJ06 578 aa24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 FAM227AF5H4B4 570 aa24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 UGDHO60701 494 aa24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 PCNAP12004 261 aa24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 MTTPP55157 894 aa24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 GTF2H2Q13888 395 aa24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 SLC29A2Q14542 456 aa24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 TMEM35AQ53FP2 167 aa24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 GTF2H2CQ6P1K8 395 aa24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 CNPY4Q8N129 248 aa24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 AMER2Q8N7J2 671 aa24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 PTGR2Q8N8N7 351 aaPredicted RBP24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 ARMC2Q8NEN0 867 aa24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 ADAMTS18Q8TE60 1221 aa24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 HAS2Q92819 552 aa24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 SNRNP40Q96DI7 357 aaKnown RBP24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 CNDP1Q96KN2 507 aa24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 KCNC2Q96PR1 638 aa24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 MRPL57Q9BQC6 102 aaKnown RBP24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 MS4A8Q9BY19 250 aa24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 ROGDIQ9GZN7 287 aa24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 COPS7BQ9H9Q2 264 aaPredicted RBP24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 PRM3Q9NNZ6 103 aa24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 PRDM7Q9NQW5 492 aa24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 XPR1Q9UBH6 696 aa24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 FETUBQ9UGM5 382 aa24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 TEKT2Q9UIF3 430 aa24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 MMACHCQ9Y4U1 282 aa24.76■■□□□ 1.55
TSPAN4-217ENST00000527644 LRRC14BA6NHZ5 514 aa24.75■■□□□ 1.55
TSPAN4-217ENST00000527644 E2F3O00716 465 aa24.75■■□□□ 1.55
TSPAN4-217ENST00000527644 SIX3O95343 332 aaPredicted RBP24.75■■□□□ 1.55
TSPAN4-217ENST00000527644 RAB38P57729 211 aa24.75■■□□□ 1.55
TSPAN4-217ENST00000527644 ARG2P78540 354 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms