RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 CHURC1Q8WUH1 139 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 UCN3Q969E3 161 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 RFT1Q96AA3 541 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 RTP4Q96DX8 246 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 CELF6Q96J87 481 aaKnown RBP5.6□□□□□ -1.51
CD44-225ENST00000527326 SFXN2Q96NB2 322 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 NT5C1BQ96P26 610 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 OR2M2Q96R28 347 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 RAD9AQ99638 391 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 C19orf43Q9BQ61 176 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 CRB3Q9BUF7 120 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 DUSP26Q9BV47 211 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 SLC29A3Q9BZD2 475 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 CD244Q9BZW8 370 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 METTL9Q9H1A3 318 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 TNKS2Q9H2K2 1166 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 ELAC1Q9H777 363 aaKnown RBP5.6□□□□□ -1.51
CD44-225ENST00000527326 ZNF408Q9H9D4 720 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 AGO3Q9H9G7 860 aaKnown RBP5.6□□□□□ -1.51
CD44-225ENST00000527326 MEAF6Q9HAF1 191 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 NMRAL1Q9HBL8 299 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 TCF7L1Q9HCS4 588 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 IL17RBQ9NRM6 502 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 PLCXD1Q9NUJ7 323 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 ABCB8Q9NUT2 735 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 NSMCE4AQ9NXX6 385 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 MUTYHQ9UIF7 546 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 FBXL21Q9UKT6 434 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 SLC39A10Q9ULF5 831 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 PCDHA9Q9Y5H5 950 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 OAS3Q9Y6K5 1087 aaKnown RBP5.6□□□□□ -1.51
CD44-225ENST00000527326 DICER1Q9UPY3 1922 aaKnown RBP5.6□□□□□ -1.51
CD44-225ENST00000527326 TAF1LQ8IZX4 1826 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 SCN11AQ9UI33 1791 aa5.6□□□□□ -1.51
CD44-225ENST00000527326 DDX60LQ5H9U9 1706 aaKnown RBP5.6□□□□□ -1.51
CD44-225ENST00000527326 PAPPAQ13219 1627 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 LOC100506127A0A0U1RQW1 187 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 C7orf66A4D0T2 115 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 MEGF11A6BM72 1044 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 FAM86C2PA6NEL3 165 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 RFPL4AA6NLU0 287 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 TMEM210A6NLX4 147 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 MARCH11A6NNE9 402 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 RFPL4AL1F8VTS6 287 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 SGK494L7N484 410 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 ANKRD28O15084 1053 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 GSTA4O15217 222 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 PLA2G10O15496 165 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 KIAA0513O60268 411 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 LCMT2O60294 686 aaKnown RBP5.59□□□□□ -1.51
CD44-225ENST00000527326 UGDHO60701 494 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 GPX5O75715 221 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 GADD45GO95257 159 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 CSF2P04141 144 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 CYBBP04839 570 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 PFKMP08237 780 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 NMBP08949 121 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 SNRPA1P09661 255 aaKnown RBP5.59□□□□□ -1.51
CD44-225ENST00000527326 MLNP12872 115 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 CYP4B1P13584 511 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 APEHP13798 732 aaKnown RBP5.59□□□□□ -1.51
CD44-225ENST00000527326 ANXA8P13928 327 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 ARF4P18085 180 aaPredicted RBP5.59□□□□□ -1.51
CD44-225ENST00000527326 SLC6A2P23975 617 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 DNASE1P24855 282 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 HMGB2P26583 209 aaKnown RBP5.59□□□□□ -1.51
CD44-225ENST00000527326 SDC4P31431 198 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 FMO3P31513 532 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 ATP6V1E1P36543 226 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 PIGAP37287 484 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 CD86P42081 329 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 MAGEA2P43356 314 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 RGS6P49758 472 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 GSK3BP49841 420 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 SULT1E1P49888 294 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 RBP2P50120 134 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 CLCN3P51790 818 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 CASP6P55212 293 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 CD81P60033 236 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 SNRPFP62306 86 aaKnown RBP5.59□□□□□ -1.51
CD44-225ENST00000527326 MAT1AQ00266 395 aaKnown RBP5.59□□□□□ -1.51
CD44-225ENST00000527326 DSC2Q02487 901 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 ILF3Q12906 894 aaKnown RBP eCLIP5.59□□□□□ -1.51
CD44-225ENST00000527326 DOC2AQ14183 400 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 PTPRRQ15256 657 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 TAF1AQ15573 450 aaPredicted RBP5.59□□□□□ -1.51
CD44-225ENST00000527326 GUCA2BQ16661 112 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 HADHQ16836 314 aaKnown RBP5.59□□□□□ -1.51
CD44-225ENST00000527326 MPEG1Q2M385 716 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 ZNF284Q2VY69 593 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 LGALSLQ3ZCW2 172 aaPredicted RBP5.59□□□□□ -1.51
CD44-225ENST00000527326 DDI2Q5TDH0 399 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 ANXA8L1Q5VT79 327 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 MLIPQ5VWP3 458 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 DHRS7BQ6IAN0 325 aaPredicted RBP5.59□□□□□ -1.51
CD44-225ENST00000527326 ZC3H14Q6PJT7 736 aaKnown RBP5.59□□□□□ -1.51
CD44-225ENST00000527326 C16orf54Q6UWD8 224 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 FAM198BQ6UWH4 519 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 LRRC8DQ7L1W4 858 aa5.59□□□□□ -1.51
CD44-225ENST00000527326 SLC26A9Q7LBE3 791 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms