RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 TMEM151AQ8N4L1 468 aa13.58□□□□□ -0.24
NXF1-204ENST00000527064 TM9SF4Q92544 642 aa13.58□□□□□ -0.24
NXF1-204ENST00000527064 SERINC2Q96SA4 455 aa13.58□□□□□ -0.24
NXF1-204ENST00000527064 SMAD5Q99717 465 aaKnown RBP13.58□□□□□ -0.24
NXF1-204ENST00000527064 TUBB6Q9BUF5 446 aa13.58□□□□□ -0.24
NXF1-204ENST00000527064 NTMT1Q9BV86 223 aa13.58□□□□□ -0.24
NXF1-204ENST00000527064 NUDT9Q9BW91 350 aa13.58□□□□□ -0.24
NXF1-204ENST00000527064 C1QTNF3Q9BXJ4 246 aa13.58□□□□□ -0.24
NXF1-204ENST00000527064 ERVK-6Q9BXR3 956 aa13.58□□□□□ -0.24
NXF1-204ENST00000527064 MS4A8Q9BY19 250 aa13.58□□□□□ -0.24
NXF1-204ENST00000527064 PARD6BQ9BYG5 372 aa13.58□□□□□ -0.24
NXF1-204ENST00000527064 AICDAQ9GZX7 198 aa13.58□□□□□ -0.24
NXF1-204ENST00000527064 LHPPQ9H008 270 aa13.58□□□□□ -0.24
NXF1-204ENST00000527064 ZNF700Q9H0M5 742 aa13.58□□□□□ -0.24
NXF1-204ENST00000527064 ZNF160Q9HCG1 818 aa13.58□□□□□ -0.24
NXF1-204ENST00000527064 LANCL2Q9NS86 450 aa13.58□□□□□ -0.24
NXF1-204ENST00000527064 TMEM216Q9P0N5 145 aa13.58□□□□□ -0.24
NXF1-204ENST00000527064 C5AR2Q9P296 337 aa13.58□□□□□ -0.24
NXF1-204ENST00000527064 ANAPC2Q9UJX6 822 aa13.58□□□□□ -0.24
NXF1-204ENST00000527064 BSNQ9UPA5 3926 aa13.58□□□□□ -0.24
NXF1-204ENST00000527064 CCDC88CQ9P219 2028 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 A0A1W2PPM1 405 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 MAGEB17A8MXT2 336 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 OR7A17O14581 309 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 DPM1O60762 260 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 TBX6O95947 436 aaPredicted RBP13.57□□□□□ -0.24
NXF1-204ENST00000527064 SBK3P0C264 359 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 ICAM2P13598 275 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 NR1D1P20393 614 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 ATP5F1P24539 256 aaPredicted RBP13.57□□□□□ -0.24
NXF1-204ENST00000527064 TSFMP43897 325 aaKnown RBP13.57□□□□□ -0.24
NXF1-204ENST00000527064 RAP1GDS1P52306 607 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 RHAGQ02094 409 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 RAPSNQ13702 412 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 DDX39BQ13838 428 aaKnown RBP13.57□□□□□ -0.24
NXF1-204ENST00000527064 ABRAXAS2Q15018 415 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 CPSF6Q16630 551 aaKnown RBP eCLIP13.57□□□□□ -0.24
NXF1-204ENST00000527064 CCDC153Q494R4 210 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 GGTA1PQ4G0N0 100 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 KHDRBS2Q5VWX1 349 aaKnown RBP13.57□□□□□ -0.24
NXF1-204ENST00000527064 ABHD17CQ6PCB6 329 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 QSOX2Q6ZRP7 698 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 RIPOR1Q6ZS17 1223 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 PRICKLE2Q7Z3G6 844 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 CPEB2Q7Z5Q1 589 aaKnown RBP13.57□□□□□ -0.24
NXF1-204ENST00000527064 ZNF605Q86T29 641 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 PTRH1Q86Y79 214 aaKnown RBP13.57□□□□□ -0.24
NXF1-204ENST00000527064 CA13Q8N1Q1 262 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 MREGQ8N565 214 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 TEX19Q8NA77 164 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 PLPP5Q8NEB5 264 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 ARMC2Q8NEN0 867 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 OR52B6Q8NGF0 335 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 HUS1BQ8NHY5 278 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 PPP4R1Q8TF05 950 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 ZNF483Q8TF39 744 aaPredicted RBP13.57□□□□□ -0.24
NXF1-204ENST00000527064 CCDC126Q96EE4 140 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 F2RL3Q96RI0 385 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 TBCDQ9BTW9 1192 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 ROPN1BQ9BZX4 212 aaPredicted RBP13.57□□□□□ -0.24
NXF1-204ENST00000527064 ROPN1Q9HAT0 212 aaPredicted RBP13.57□□□□□ -0.24
NXF1-204ENST00000527064 DMRT3Q9NQL9 472 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 RAB21Q9UL25 225 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 MRPS33Q9Y291 106 aaKnown RBP13.57□□□□□ -0.24
NXF1-204ENST00000527064 STK38LQ9Y2H1 464 aa13.57□□□□□ -0.24
NXF1-204ENST00000527064 A0A0G2JN53 185 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 TLDC2A0PJX2 215 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 SYNDIG1LA6NDD5 238 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 K7EM74 188 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 COPEO14579 308 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 PRMT3O60678 531 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 B4GALT2O60909 372 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 TGFB1P01137 390 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 PDGFAP04085 211 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 CRHR1P34998 444 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 SSR2P43308 183 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 ARFIP1P53367 373 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 RAB38P57729 211 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 PCOLCEQ15113 449 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 ZRSR2Q15696 482 aaKnown RBP13.56□□□□□ -0.24
NXF1-204ENST00000527064 NSDHLQ15738 373 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 AP5B1Q2VPB7 878 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 AGAP7PQ5VUJ5 663 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 TTC19Q6DKK2 380 aaPredicted RBP13.56□□□□□ -0.24
NXF1-204ENST00000527064 ATG14Q6ZNE5 492 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 ANKRD37Q7Z713 158 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 PARP9Q8IXQ6 854 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 CYP4X1Q8N118 509 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 THOC3Q96J01 351 aaKnown RBP13.56□□□□□ -0.24
NXF1-204ENST00000527064 NSUN5Q96P11 429 aaKnown RBP13.56□□□□□ -0.24
NXF1-204ENST00000527064 AGAP4Q96P64 663 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 QRFPRQ96P65 431 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 MTERF1Q99551 399 aaKnown RBP13.56□□□□□ -0.24
NXF1-204ENST00000527064 IQCGQ9H095 443 aaKnown RBP13.56□□□□□ -0.24
NXF1-204ENST00000527064 SEMA4BQ9NPR2 832 aaPredicted RBP13.56□□□□□ -0.24
NXF1-204ENST00000527064 PRDM9Q9NQV7 894 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 PSD3Q9NYI0 1048 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 MID2Q9UJV3 735 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 GRID1Q9ULK0 1009 aa13.56□□□□□ -0.24
NXF1-204ENST00000527064 RNF11Q9Y3C5 154 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms