RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 RAB8AP61006 207 aa19.65■□□□□ 0.74
CD44-222ENST00000526025 MC1RQ01726 317 aa19.65■□□□□ 0.74
CD44-222ENST00000526025 NKG7Q16617 165 aa19.65■□□□□ 0.74
CD44-222ENST00000526025 KANK2Q63ZY3 851 aa19.65■□□□□ 0.74
CD44-222ENST00000526025 VASH2Q86V25 355 aa19.65■□□□□ 0.74
CD44-222ENST00000526025 ENDOVQ8N8Q3 282 aaKnown RBP19.65■□□□□ 0.74
CD44-222ENST00000526025 OR2Y1Q8NGV0 311 aa19.65■□□□□ 0.74
CD44-222ENST00000526025 CNTNAP3BQ96NU0 1288 aa19.65■□□□□ 0.74
CD44-222ENST00000526025 DCBLD2Q96PD2 775 aa19.65■□□□□ 0.74
CD44-222ENST00000526025 OR1F2PQ96R84 312 aa19.65■□□□□ 0.74
CD44-222ENST00000526025 PAIP2Q9BPZ3 127 aaKnown RBP19.65■□□□□ 0.74
CD44-222ENST00000526025 CNTNAP3Q9BZ76 1288 aa19.65■□□□□ 0.74
CD44-222ENST00000526025 OR51B5Q9H339 312 aa19.65■□□□□ 0.74
CD44-222ENST00000526025 MLXIPLQ9NP71 852 aa19.65■□□□□ 0.74
CD44-222ENST00000526025 TCFL5Q9UL49 500 aa19.65■□□□□ 0.74
CD44-222ENST00000526025 ZMIZ1Q9ULJ6 1067 aa19.65■□□□□ 0.74
CD44-222ENST00000526025 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.65■□□□□ 0.74
CD44-222ENST00000526025 ZFHX4Q86UP3 3567 aa19.65■□□□□ 0.74
CD44-222ENST00000526025 SGK494L7N484 410 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 KLF11O14901 512 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 RDH16O75452 317 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 KLF7O75840 302 aaPredicted RBP19.64■□□□□ 0.73
CD44-222ENST00000526025 BGNP21810 368 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 F8A1P23610 371 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 ARRB2P32121 409 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 RAP1GDS1P52306 607 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 PLA2G16P53816 162 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 FOXA1P55317 472 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 ABCE1P61221 599 aaKnown RBP19.64■□□□□ 0.73
CD44-222ENST00000526025 OCA2Q04671 838 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 HSP90B2PQ58FF3 399 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 MLIPQ5VWP3 458 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 TRIM46Q7Z4K8 759 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 UBE3DQ7Z6J8 389 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 CLYBLQ8N0X4 340 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 ZCCHC7Q8N3Z6 543 aaKnown RBP19.64■□□□□ 0.73
CD44-222ENST00000526025 RNF175Q8N4F7 328 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 MGARPQ8TDB4 240 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 ADAMTS18Q8TE60 1221 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 NACC2Q96BF6 587 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 KCNA7Q96RP8 456 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 ACTL8Q9H568 366 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 COPS7BQ9H9Q2 264 aaPredicted RBP19.64■□□□□ 0.73
CD44-222ENST00000526025 TNFRSF12AQ9NP84 129 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 AHSPQ9NZD4 102 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 TRPC4Q9UBN4 977 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 CTSFQ9UBX1 484 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 IL17BQ9UHF5 180 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 HAO1Q9UJM8 370 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 ADAM29Q9UKF5 820 aa19.64■□□□□ 0.73
CD44-222ENST00000526025 PLPP1O14494 284 aa19.63■□□□□ 0.73
CD44-222ENST00000526025 B3GALT2O43825 422 aa19.63■□□□□ 0.73
CD44-222ENST00000526025 ETHE1O95571 254 aa19.63■□□□□ 0.73
CD44-222ENST00000526025 CHEK2O96017 543 aa19.63■□□□□ 0.73
CD44-222ENST00000526025 NEFHP12036 1026 aa19.63■□□□□ 0.73
CD44-222ENST00000526025 HIST1H1TP22492 207 aaPredicted RBP19.63■□□□□ 0.73
CD44-222ENST00000526025 BTN3A2P78410 334 aa19.63■□□□□ 0.73
CD44-222ENST00000526025 STX3Q13277 289 aa19.63■□□□□ 0.73
CD44-222ENST00000526025 SLC9A5Q14940 896 aa19.63■□□□□ 0.73
CD44-222ENST00000526025 AP5B1Q2VPB7 878 aa19.63■□□□□ 0.73
CD44-222ENST00000526025 TCHHL1Q5QJ38 904 aaPredicted RBP19.63■□□□□ 0.73
CD44-222ENST00000526025 CES4AQ5XG92 561 aa19.63■□□□□ 0.73
CD44-222ENST00000526025 OR51Q1Q8NH59 317 aa19.63■□□□□ 0.73
CD44-222ENST00000526025 STT3BQ8TCJ2 826 aa19.63■□□□□ 0.73
CD44-222ENST00000526025 SPSB2Q99619 263 aa19.63■□□□□ 0.73
CD44-222ENST00000526025 ZNF717Q9BY31 904 aaPredicted RBP19.63■□□□□ 0.73
CD44-222ENST00000526025 LYRM4Q9HD34 91 aa19.63■□□□□ 0.73
CD44-222ENST00000526025 PRM3Q9NNZ6 103 aa19.63■□□□□ 0.73
CD44-222ENST00000526025 FARSBQ9NSD9 589 aaKnown RBP19.63■□□□□ 0.73
CD44-222ENST00000526025 TRAF6Q9Y4K3 522 aa19.63■□□□□ 0.73
CD44-222ENST00000526025 TIMM22Q9Y584 194 aa19.63■□□□□ 0.73
CD44-222ENST00000526025 CELSR3Q9NYQ7 3312 aa19.63■□□□□ 0.73
CD44-222ENST00000526025 USP24Q9UPU5 2620 aa19.63■□□□□ 0.73
CD44-222ENST00000526025 ZNF891A8MT65 544 aaPredicted RBP19.62■□□□□ 0.73
CD44-222ENST00000526025 NPIPB8E9PQR5 432 aa19.62■□□□□ 0.73
CD44-222ENST00000526025 PCDH17O14917 1159 aa19.62■□□□□ 0.73
CD44-222ENST00000526025 CNOT3O75175 753 aaKnown RBP19.62■□□□□ 0.73
CD44-222ENST00000526025 CREG1O75629 220 aa19.62■□□□□ 0.73
CD44-222ENST00000526025 HSPA4LO95757 839 aa19.62■□□□□ 0.73
CD44-222ENST00000526025 ZGLP1P0C6A0 271 aa19.62■□□□□ 0.73
CD44-222ENST00000526025 NR1D1P20393 614 aa19.62■□□□□ 0.73
CD44-222ENST00000526025 ATP5A1P25705 553 aaKnown RBP19.62■□□□□ 0.73
CD44-222ENST00000526025 SLC1A6P48664 564 aa19.62■□□□□ 0.73
CD44-222ENST00000526025 HTR6P50406 440 aa19.62■□□□□ 0.73
CD44-222ENST00000526025 TMPRSS3P57727 454 aa19.62■□□□□ 0.73
CD44-222ENST00000526025 ABRAXAS2Q15018 415 aa19.62■□□□□ 0.73
CD44-222ENST00000526025 SGO1Q5FBB7 561 aa19.62■□□□□ 0.73
CD44-222ENST00000526025 ATG16L1Q676U5 607 aa19.62■□□□□ 0.73
CD44-222ENST00000526025 OR4C11Q6IEV9 310 aa19.62■□□□□ 0.73
CD44-222ENST00000526025 ZC3H7AQ8IWR0 971 aaKnown RBP19.62■□□□□ 0.73
CD44-222ENST00000526025 ZSCAN1Q8NBB4 408 aa19.62■□□□□ 0.73
CD44-222ENST00000526025 SNRNP27Q8WVK2 155 aaKnown RBP19.62■□□□□ 0.73
CD44-222ENST00000526025 STARD8Q92502 1023 aa19.62■□□□□ 0.73
CD44-222ENST00000526025 MIEF2Q96C03 454 aa19.62■□□□□ 0.73
CD44-222ENST00000526025 MTFMTQ96DP5 389 aaKnown RBP19.62■□□□□ 0.73
CD44-222ENST00000526025 METTL2AQ96IZ6 378 aaKnown RBP19.62■□□□□ 0.73
CD44-222ENST00000526025 CCT7Q99832 543 aa19.62■□□□□ 0.73
CD44-222ENST00000526025 DDX31Q9H8H2 851 aaKnown RBP19.62■□□□□ 0.73
CD44-222ENST00000526025 VPS29Q9UBQ0 182 aa19.62■□□□□ 0.73
CD44-222ENST00000526025 RAP2CQ9Y3L5 183 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms