RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 TUBB1Q9H4B7 451 aa3.53□□□□□ -1.84
CD44-215ENST00000525241 TMEM206Q9H813 350 aa3.53□□□□□ -1.84
CD44-215ENST00000525241 SRD5A3Q9H8P0 318 aa3.53□□□□□ -1.84
CD44-215ENST00000525241 C3orf14Q9HBI5 128 aa3.53□□□□□ -1.84
CD44-215ENST00000525241 DBF4Q9UBU7 674 aaPredicted RBP3.53□□□□□ -1.84
CD44-215ENST00000525241 ZHX2Q9Y6X8 837 aa3.53□□□□□ -1.84
CD44-215ENST00000525241 COL2A1P02458 1487 aaPredicted RBP3.53□□□□□ -1.84
CD44-215ENST00000525241 IGLV4-3A0A075B6K6 122 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 A4D1N5 150 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 SERINC4A6NH21 518 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 SDR42E2A6NKP2 422 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 A8MU76 341 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 H0Y626 953 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 IGHV3-13P01766 116 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 CAPGP40121 348 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 ETV5P41161 510 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 FRKP42685 505 aaPredicted RBP3.52□□□□□ -1.85
CD44-215ENST00000525241 ABCE1P61221 599 aaKnown RBP3.52□□□□□ -1.85
CD44-215ENST00000525241 FKBP1BP68106 108 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 FKBP3Q00688 224 aaKnown RBP3.52□□□□□ -1.85
CD44-215ENST00000525241 ANKRD20A4Q4UJ75 823 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 ANKRD20A8PQ5CZ79 823 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 TCTEX1D4Q5JR98 221 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 ANKRD20A2Q5SQ80 823 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 ANKRD20A1Q5TYW2 823 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 ANKRD20A3Q5VUR7 823 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 PLPP4Q5VZY2 271 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 GBP6Q6ZN66 633 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 OTOAQ7RTW8 1153 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 HOOK3Q86VS8 718 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 PHC2Q8IXK0 858 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 SMYD1Q8NB12 490 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 OR7G3Q8NG95 312 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 SSC4DQ8WTU2 575 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 NPRL2Q8WTW4 380 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 RASL10AQ92737 203 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 SLC35C1Q96A29 364 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 SNRNP40Q96DI7 357 aaKnown RBP3.52□□□□□ -1.85
CD44-215ENST00000525241 PDLIM5Q96HC4 596 aaKnown RBP3.52□□□□□ -1.85
CD44-215ENST00000525241 C17orf62Q9BQA9 187 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 SLC39A8Q9C0K1 460 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 GNB4Q9HAV0 340 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 TMED7Q9Y3B3 224 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 CSAG2Q9Y5P2 127 aa3.52□□□□□ -1.85
CD44-215ENST00000525241 ARHGEF33A8MVX0 844 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 TCP10L2B9ZVM9 353 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 ANHXE9PGG2 379 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 H0YIG0 161 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 P2RX6O15547 441 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 SLC7A4O43246 635 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 ANGPTL1O95841 491 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 SLC16A8O95907 504 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 HPRP00739 348 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 PCP11498 1178 aaKnown RBP3.51□□□□□ -1.85
CD44-215ENST00000525241 ACADSP16219 412 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 CAPN2P17655 700 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 ITIH1P19827 911 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 OXTRP30559 389 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 TCF7P36402 384 aaPredicted RBP3.51□□□□□ -1.85
CD44-215ENST00000525241 SLC1A3P43003 542 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 CLCN4P51793 760 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 BACE1P56817 501 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 SLC8A3P57103 927 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 EVCP57679 992 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 IRX6P78412 446 aaPredicted RBP3.51□□□□□ -1.85
CD44-215ENST00000525241 AKAP17AQ02040 695 aaKnown RBP3.51□□□□□ -1.85
CD44-215ENST00000525241 COX10Q12887 443 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 GPR50Q13585 617 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 MLF2Q15773 248 aaPredicted RBP3.51□□□□□ -1.85
CD44-215ENST00000525241 TYSND1Q2T9J0 566 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 CDHR3Q6ZTQ4 885 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 TUSC5Q8IXB3 177 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 AQP12AQ8IXF9 295 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 SLC43A2Q8N370 569 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 UBLCP1Q8WVY7 318 aaPredicted RBP3.51□□□□□ -1.85
CD44-215ENST00000525241 SMPDL3AQ92484 453 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 BPIFA2Q96DR5 249 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 CHCHD5Q9BSY4 110 aa3.51□□□□□ -1.85
CD44-215ENST00000525241 C2orf92A0A1B0GVN3 265 aa3.5□□□□□ -1.85
CD44-215ENST00000525241 SRRM4A7MD48 611 aaKnown RBP3.5□□□□□ -1.85
CD44-215ENST00000525241 PSMA7O14818 248 aa3.5□□□□□ -1.85
CD44-215ENST00000525241 STX6O43752 255 aa3.5□□□□□ -1.85
CD44-215ENST00000525241 GRAP2O75791 330 aa3.5□□□□□ -1.85
CD44-215ENST00000525241 GH1P01241 217 aa3.5□□□□□ -1.85
CD44-215ENST00000525241 HSP90AB1P08238 724 aaKnown RBP3.5□□□□□ -1.85
CD44-215ENST00000525241 PRELPP51888 382 aa3.5□□□□□ -1.85
CD44-215ENST00000525241 ARHGAP1Q07960 439 aa3.5□□□□□ -1.85
CD44-215ENST00000525241 CEACAM7Q14002 265 aa3.5□□□□□ -1.85
CD44-215ENST00000525241 AGAP6Q5VW22 663 aa3.5□□□□□ -1.85
CD44-215ENST00000525241 ZNF776Q68DI1 518 aaPredicted RBP3.5□□□□□ -1.85
CD44-215ENST00000525241 SIGLEC15Q6ZMC9 328 aa3.5□□□□□ -1.85
CD44-215ENST00000525241 LINC00696Q6ZRV3 163 aa3.5□□□□□ -1.85
CD44-215ENST00000525241 RFPL4BQ6ZWI9 263 aa3.5□□□□□ -1.85
CD44-215ENST00000525241 Q71RC1 249 aaPredicted RBP3.5□□□□□ -1.85
CD44-215ENST00000525241 ANKRD23Q86SG2 305 aa3.5□□□□□ -1.85
CD44-215ENST00000525241 SLC47A2Q86VL8 602 aa3.5□□□□□ -1.85
CD44-215ENST00000525241 CARM1Q86X55 608 aa3.5□□□□□ -1.85
CD44-215ENST00000525241 SIAH3Q8IW03 269 aa3.5□□□□□ -1.85
CD44-215ENST00000525241 LMNTD2Q8IXW0 634 aa3.5□□□□□ -1.85
CD44-215ENST00000525241 OR13C5Q8NGS8 318 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms