RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 SHANK1Q9Y566 2161 aa19.68■□□□□ 0.74
TRAPPC9-215ENST00000524162 ZNF860A6NHJ4 632 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 CDK2AP1O14519 115 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 ERI3O43414 337 aaKnown RBP19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 SMIM24O75264 130 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 SCELO95171 688 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 GSTA1P08263 222 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 GTF2H2Q13888 395 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 RCN2Q14257 317 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 GTF2H2CQ6P1K8 395 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 ISLR2Q6UXK2 745 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 Q6ZS92 163 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 ANKRD37Q7Z713 158 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 TDRPQ86YL5 185 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 PARP9Q8IXQ6 854 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 TMEM151AQ8N4L1 468 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 ZADH2Q8N4Q0 377 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 L3MBTL4Q8NA19 623 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 C7orf57Q8NEG2 295 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 PSMF1Q92530 271 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 REPS1Q96D71 796 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 CMTM7Q96FZ5 175 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 MAGEB10Q96LZ2 347 aaPredicted RBP19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 KCNC2Q96PR1 638 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 SERINC2Q96SA4 455 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 MESP1Q9BRJ9 268 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 NTMT1Q9BV86 223 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 MS4A8Q9BY19 250 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 ZNF358Q9NW07 568 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 XPR1Q9UBH6 696 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 B3GNT3Q9Y2A9 372 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 MMACHCQ9Y4U1 282 aa19.67■□□□□ 0.74
TRAPPC9-215ENST00000524162 IGKV3D-11A0A0A0MRZ8 115 aa19.66■□□□□ 0.74
TRAPPC9-215ENST00000524162 C4orf51C9J302 202 aa19.66■□□□□ 0.74
TRAPPC9-215ENST00000524162 PSMD12O00232 456 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC9-215ENST00000524162 B3GALT2O43825 422 aa19.66■□□□□ 0.74
TRAPPC9-215ENST00000524162 SOX11P35716 441 aa19.66■□□□□ 0.74
TRAPPC9-215ENST00000524162 CD97P48960 835 aa19.66■□□□□ 0.74
TRAPPC9-215ENST00000524162 MTTPP55157 894 aa19.66■□□□□ 0.74
TRAPPC9-215ENST00000524162 EEF1A2Q05639 463 aaKnown RBP19.66■□□□□ 0.74
TRAPPC9-215ENST00000524162 MFAP5Q13361 173 aa19.66■□□□□ 0.74
TRAPPC9-215ENST00000524162 ABRAXAS2Q15018 415 aa19.66■□□□□ 0.74
TRAPPC9-215ENST00000524162 NSDHLQ15738 373 aa19.66■□□□□ 0.74
TRAPPC9-215ENST00000524162 EXT1Q16394 746 aa19.66■□□□□ 0.74
TRAPPC9-215ENST00000524162 SLC6A19Q695T7 634 aa19.66■□□□□ 0.74
TRAPPC9-215ENST00000524162 CHSY3Q70JA7 882 aa19.66■□□□□ 0.74
TRAPPC9-215ENST00000524162 CA13Q8N1Q1 262 aa19.66■□□□□ 0.74
TRAPPC9-215ENST00000524162 WDR77Q9BQA1 342 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC9-215ENST00000524162 TBCDQ9BTW9 1192 aa19.66■□□□□ 0.74
TRAPPC9-215ENST00000524162 EPS8L2Q9H6S3 715 aa19.66■□□□□ 0.74
TRAPPC9-215ENST00000524162 IPPKQ9H8X2 491 aa19.66■□□□□ 0.74
TRAPPC9-215ENST00000524162 ANKZF1Q9H8Y5 726 aa19.66■□□□□ 0.74
TRAPPC9-215ENST00000524162 ACTR8Q9H981 624 aa19.66■□□□□ 0.74
TRAPPC9-215ENST00000524162 PRDM9Q9NQV7 894 aa19.66■□□□□ 0.74
TRAPPC9-215ENST00000524162 CPSF2Q9P2I0 782 aaKnown RBP19.66■□□□□ 0.74
TRAPPC9-215ENST00000524162 LRRK2Q5S007 2527 aa19.66■□□□□ 0.74
TRAPPC9-215ENST00000524162 BLACEA4D250 179 aa19.65■□□□□ 0.74
TRAPPC9-215ENST00000524162 MASP2O00187 686 aa19.65■□□□□ 0.74
TRAPPC9-215ENST00000524162 PRMT3O60678 531 aa19.65■□□□□ 0.74
TRAPPC9-215ENST00000524162 WISP1O95388 367 aa19.65■□□□□ 0.74
TRAPPC9-215ENST00000524162 HSD17B7P56937 341 aa19.65■□□□□ 0.74
TRAPPC9-215ENST00000524162 BTN3A2P78410 334 aa19.65■□□□□ 0.74
TRAPPC9-215ENST00000524162 FOXK1P85037 733 aa19.65■□□□□ 0.74
TRAPPC9-215ENST00000524162 RAPSNQ13702 412 aa19.65■□□□□ 0.74
TRAPPC9-215ENST00000524162 NADK2Q4G0N4 442 aa19.65■□□□□ 0.74
TRAPPC9-215ENST00000524162 MFSD4BQ5TF39 518 aa19.65■□□□□ 0.74
TRAPPC9-215ENST00000524162 FAAH2Q6GMR7 532 aa19.65■□□□□ 0.74
TRAPPC9-215ENST00000524162 H3F3CQ6NXT2 135 aa19.65■□□□□ 0.74
TRAPPC9-215ENST00000524162 GOLGA7Q7Z5G4 137 aa19.65■□□□□ 0.74
TRAPPC9-215ENST00000524162 PTGR2Q8N8N7 351 aaPredicted RBP19.65■□□□□ 0.74
TRAPPC9-215ENST00000524162 M1APQ8TC57 530 aa19.65■□□□□ 0.74
TRAPPC9-215ENST00000524162 MZB1Q8WU39 189 aa19.65■□□□□ 0.74
TRAPPC9-215ENST00000524162 CCT6BQ92526 530 aa19.65■□□□□ 0.74
TRAPPC9-215ENST00000524162 RNF32Q9H0A6 362 aa19.65■□□□□ 0.74
TRAPPC9-215ENST00000524162 LYRM4Q9HD34 91 aa19.65■□□□□ 0.74
TRAPPC9-215ENST00000524162 PRDM7Q9NQW5 492 aa19.65■□□□□ 0.74
TRAPPC9-215ENST00000524162 MRPS33Q9Y291 106 aaKnown RBP19.65■□□□□ 0.74
TRAPPC9-215ENST00000524162 TCRBV16S1A1N1A0A5B0 115 aa19.64■□□□□ 0.73
TRAPPC9-215ENST00000524162 FOXE1O00358 373 aaPredicted RBP19.64■□□□□ 0.73
TRAPPC9-215ENST00000524162 DNAJB6O75190 326 aa19.64■□□□□ 0.73
TRAPPC9-215ENST00000524162 CLDN9O95484 217 aa19.64■□□□□ 0.73
TRAPPC9-215ENST00000524162 SBK3P0C264 359 aa19.64■□□□□ 0.73
TRAPPC9-215ENST00000524162 RAB38P57729 211 aa19.64■□□□□ 0.73
TRAPPC9-215ENST00000524162 PHEXP78562 749 aa19.64■□□□□ 0.73
TRAPPC9-215ENST00000524162 TERF2Q15554 542 aa19.64■□□□□ 0.73
TRAPPC9-215ENST00000524162 GGTA1PQ4G0N0 100 aa19.64■□□□□ 0.73
TRAPPC9-215ENST00000524162 DEPDC1Q5TB30 811 aa19.64■□□□□ 0.73
TRAPPC9-215ENST00000524162 LANCL3Q6ZV70 420 aa19.64■□□□□ 0.73
TRAPPC9-215ENST00000524162 ZNF595Q8IYB9 648 aa19.64■□□□□ 0.73
TRAPPC9-215ENST00000524162 Q8NA96 180 aa19.64■□□□□ 0.73
TRAPPC9-215ENST00000524162 ARMC2Q8NEN0 867 aa19.64■□□□□ 0.73
TRAPPC9-215ENST00000524162 SCYL1Q96KG9 808 aa19.64■□□□□ 0.73
TRAPPC9-215ENST00000524162 LPAR4Q99677 370 aa19.64■□□□□ 0.73
TRAPPC9-215ENST00000524162 CENPKQ9BS16 269 aa19.64■□□□□ 0.73
TRAPPC9-215ENST00000524162 MMP25Q9NPA2 562 aa19.64■□□□□ 0.73
TRAPPC9-215ENST00000524162 PCTPQ9UKL6 214 aa19.64■□□□□ 0.73
TRAPPC9-215ENST00000524162 DAPP1Q9UN19 280 aa19.64■□□□□ 0.73
TRAPPC9-215ENST00000524162 ESPL1Q14674 2120 aa19.64■□□□□ 0.73
TRAPPC9-215ENST00000524162 CLDN4O14493 209 aa19.63■□□□□ 0.73
TRAPPC9-215ENST00000524162 SIX3O95343 332 aaPredicted RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms