RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 MSH2P43246 934 aa17.99■□□□□ 0.47
FBXO28-205ENST00000523990 ALDH18A1P54886 795 aaKnown RBP17.99■□□□□ 0.47
FBXO28-205ENST00000523990 BTN3A2P78410 334 aa17.99■□□□□ 0.47
FBXO28-205ENST00000523990 PFKFB4Q16877 469 aa17.99■□□□□ 0.47
FBXO28-205ENST00000523990 SFT2D3Q587I9 215 aa17.99■□□□□ 0.47
FBXO28-205ENST00000523990 GALNT11Q8NCW6 608 aa17.99■□□□□ 0.47
FBXO28-205ENST00000523990 SNRNP40Q96DI7 357 aaKnown RBP17.99■□□□□ 0.47
FBXO28-205ENST00000523990 FAR2Q96K12 515 aa17.99■□□□□ 0.47
FBXO28-205ENST00000523990 ZNF358Q9NW07 568 aa17.99■□□□□ 0.47
FBXO28-205ENST00000523990 UTP20O75691 2785 aaKnown RBP17.99■□□□□ 0.47
FBXO28-205ENST00000523990 EXOC1LA0A1B0GW35 172 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 PSMD12O00232 456 aaPredicted RBP17.98■□□□□ 0.47
FBXO28-205ENST00000523990 B4GALT2O60909 372 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 VPS4BO75351 444 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 EPB42P16452 691 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 UQCRFS1P47985 274 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 ZNF169Q14929 603 aaPredicted RBP17.98■□□□□ 0.47
FBXO28-205ENST00000523990 HIST2H2ACQ16777 129 aaPredicted RBP17.98■□□□□ 0.47
FBXO28-205ENST00000523990 BTBD16Q32M84 506 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 B3GNTL1Q67FW5 361 aaPredicted RBP17.98■□□□□ 0.47
FBXO28-205ENST00000523990 HIST2H2AA3Q6FI13 130 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 TRIM40Q6P9F5 258 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 PAPD4Q6PIY7 484 aaKnown RBP17.98■□□□□ 0.47
FBXO28-205ENST00000523990 LAS2Q8IYD9 372 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 DNAJB14Q8TBM8 379 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 C19orf60Q96EN9 201 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 CNDP1Q96KN2 507 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 QRFPRQ96P65 431 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 NPLQ9BXD5 320 aaPredicted RBP17.98■□□□□ 0.47
FBXO28-205ENST00000523990 MS4A8Q9BY19 250 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 VPS4AQ9UN37 437 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 A0A088AWK7 358 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 TRIM49D1C9J1S8 452 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 RIPK2O43353 540 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 PRMT3O60678 531 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 ZNF10P21506 573 aaPredicted RBP17.98■□□□□ 0.47
FBXO28-205ENST00000523990 GCAP28676 217 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 PLA2G16P53816 162 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 BTG2P78543 158 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 PCBP2Q15366 365 aaKnown RBP eCLIP17.98■□□□□ 0.47
FBXO28-205ENST00000523990 EXT1Q16394 746 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 GRHL2Q6ISB3 625 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 ABHD17CQ6PCB6 329 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 TRMT10CQ7L0Y3 403 aaKnown RBP17.98■□□□□ 0.47
FBXO28-205ENST00000523990 TEX9Q8N6V9 391 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 ZNF473Q8WTR7 871 aaKnown RBP17.98■□□□□ 0.47
FBXO28-205ENST00000523990 UBE2E3Q969T4 207 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 PTCHD1Q96NR3 888 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 LPAR4Q99677 370 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 TXLNGYQ9BZA5 131 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 CPSF2Q9P2I0 782 aaKnown RBP17.98■□□□□ 0.47
FBXO28-205ENST00000523990 XPR1Q9UBH6 696 aa17.98■□□□□ 0.47
FBXO28-205ENST00000523990 ESPL1Q14674 2120 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 IGKV3D-11A0A0A0MRZ8 115 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 CLEC18AA5D8T8 446 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 LRRC14BA6NHZ5 514 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 FAM227AF5H4B4 570 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 UQCRHP07919 91 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 FAM153BP0C7A2 387 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 MAOAP21397 527 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 CERS1P27544 350 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 TSFMP43897 325 aaKnown RBP17.97■□□□□ 0.47
FBXO28-205ENST00000523990 OR4D2P58180 307 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 ARG2P78540 354 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 RUNX2Q13950 521 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 TLR1Q15399 786 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 TSNAXIP1Q2TAA8 658 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 FAM153CQ494X1 144 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 MED27Q6P2C8 311 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 CLEC18BQ6UXF7 455 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 CISD2Q8N5K1 135 aaKnown RBP17.97■□□□□ 0.47
FBXO28-205ENST00000523990 CLEC18CQ8NCF0 446 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 OR7G3Q8NG95 312 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 M1APQ8TC57 530 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 SERINC2Q96SA4 455 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 L2HGDHQ9H9P8 463 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 MMP25Q9NPA2 562 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 PRDM9Q9NQV7 894 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 ASF1BQ9NVP2 202 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 MAP10Q9P2G4 905 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 NTNG1Q9Y2I2 539 aa17.97■□□□□ 0.47
FBXO28-205ENST00000523990 DOPEY2Q9Y3R5 2298 aa17.96■□□□□ 0.47
FBXO28-205ENST00000523990 HECTD1Q9ULT8 2610 aa17.96■□□□□ 0.47
FBXO28-205ENST00000523990 TCRBV16S1A1N1A0A5B0 115 aa17.96■□□□□ 0.47
FBXO28-205ENST00000523990 DYTNA2CJ06 578 aa17.96■□□□□ 0.47
FBXO28-205ENST00000523990 E2F3O00716 465 aa17.96■□□□□ 0.47
FBXO28-205ENST00000523990 B3GALT2O43825 422 aa17.96■□□□□ 0.47
FBXO28-205ENST00000523990 SIX3O95343 332 aaPredicted RBP17.96■□□□□ 0.47
FBXO28-205ENST00000523990 COL6A2P12110 1019 aa17.96■□□□□ 0.47
FBXO28-205ENST00000523990 GNLYP22749 145 aa17.96■□□□□ 0.47
FBXO28-205ENST00000523990 RAB38P57729 211 aa17.96■□□□□ 0.47
FBXO28-205ENST00000523990 SLC26A5P58743 744 aa17.96■□□□□ 0.47
FBXO28-205ENST00000523990 H3F3CQ6NXT2 135 aa17.96■□□□□ 0.47
FBXO28-205ENST00000523990 METTL2BQ6P1Q9 378 aaKnown RBP17.96■□□□□ 0.47
FBXO28-205ENST00000523990 GSPT2Q8IYD1 628 aaKnown RBP17.96■□□□□ 0.47
FBXO28-205ENST00000523990 CATSPER1Q8NEC5 780 aa17.96■□□□□ 0.47
FBXO28-205ENST00000523990 HAS2Q92819 552 aa17.96■□□□□ 0.47
FBXO28-205ENST00000523990 KCNC2Q96PR1 638 aa17.96■□□□□ 0.47
FBXO28-205ENST00000523990 F2RL3Q96RI0 385 aa17.96■□□□□ 0.47
FBXO28-205ENST00000523990 BARD1Q99728 777 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms