RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 ARSFP54793 590 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 ADPRHP54922 357 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 MYBPC1Q00872 1141 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 IL17AQ16552 155 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 NDUFAF6Q330K2 333 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 HSD17B12Q53GQ0 312 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 EFHC2Q5JST6 749 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 CCNYL2Q5T2Q4 361 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 TYW3Q6IPR3 259 aaKnown RBP7.25□□□□□ -1.25
HDAC3-216ENST00000523088 TRAT1Q6PIZ9 186 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 FAM111BQ6SJ93 734 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 RSPO2Q6UXX9 243 aaPredicted RBP7.25□□□□□ -1.25
HDAC3-216ENST00000523088 DENND5BQ6ZUT9 1274 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 POLNQ7Z5Q5 900 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 LHFPL4Q7Z7J7 247 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 TMC8Q8IU68 726 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 SULF2Q8IWU5 870 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 KBTBD2Q8IY47 623 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 PRSS58Q8IYP2 241 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 CADM2Q8N3J6 435 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 FAM160A2Q8N612 972 aaPredicted RBP7.25□□□□□ -1.25
HDAC3-216ENST00000523088 POMGNT2Q8NAT1 580 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 BPIFCQ8NFQ6 507 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 BEST2Q8NFU1 509 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 OR5D18Q8NGL1 313 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 OR2T34Q8NGX1 318 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 OR2T3Q8NH03 318 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 SLC7A14Q8TBB6 771 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 ST8SIA4Q92187 359 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 RAD54LQ92698 747 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 FAM120BQ96EK7 910 aaKnown RBP7.25□□□□□ -1.25
HDAC3-216ENST00000523088 RRNAD1Q96FB5 475 aaKnown RBP7.25□□□□□ -1.25
HDAC3-216ENST00000523088 PNMA5Q96PV4 448 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 REEP2Q9BRK0 252 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 PAAF1Q9BRP4 392 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 TUBGCP2Q9BSJ2 902 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 PCGF1Q9BSM1 259 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.25□□□□□ -1.25
HDAC3-216ENST00000523088 DNTTIP1Q9H147 329 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 DUSP15Q9H1R2 295 aaPredicted RBP7.25□□□□□ -1.25
HDAC3-216ENST00000523088 CHRDQ9H2X0 955 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 ASB7Q9H672 318 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 RPF1Q9H9Y2 349 aaKnown RBP7.25□□□□□ -1.25
HDAC3-216ENST00000523088 PRDM7Q9NQW5 492 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 EIF2B3Q9NR50 452 aaKnown RBP7.25□□□□□ -1.25
HDAC3-216ENST00000523088 SLC2A4RGQ9NR83 387 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 SMOXQ9NWM0 555 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 NCDNQ9UBB6 729 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 TBX20Q9UMR3 447 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 AP4S1Q9Y587 144 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 ALG5Q9Y673 324 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 AP4B1Q9Y6B7 739 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 CDY1Q9Y6F8 540 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 HSPE1-MOB4S4R3N1 261 aa7.25□□□□□ -1.25
HDAC3-216ENST00000523088 A0A0U1RQS6 177 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 BTBD17A6NE02 478 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 ANHXE9PGG2 379 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 NEDD8-MDP1E9PL57 170 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 J3QW42 95 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 PIK3R2O00459 728 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 SOCS6O14544 535 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 PRRG1O14668 218 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 STX7O15400 261 aaKnown RBP7.24□□□□□ -1.25
HDAC3-216ENST00000523088 ADAM12O43184 909 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 UGT1A9O60656 530 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 FKBP6O75344 327 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 ERN1O75460 977 aaKnown RBP7.24□□□□□ -1.25
HDAC3-216ENST00000523088 SLC22A5O76082 557 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 FGF19O95750 216 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 EDN1P05305 212 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 KLK3P07288 261 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-216ENST00000523088 HOXC4P09017 264 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-216ENST00000523088 ACSM4P0C7M7 580 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 OR8G3PP0DMU2 310 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 THRBP10828 461 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 UGT1A6P19224 532 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 AOC1P19801 751 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 ITIH2P19823 946 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 OGNP20774 298 aaKnown RBP7.24□□□□□ -1.25
HDAC3-216ENST00000523088 UGT1A1P22309 533 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 MMP8P22894 467 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 DCKP27707 260 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 ERP29P30040 261 aaKnown RBP7.24□□□□□ -1.25
HDAC3-216ENST00000523088 OTX1P32242 354 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-216ENST00000523088 CXCR5P32302 372 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 MPIP34949 423 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 DDOSTP39656 456 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 ETV4P43268 484 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 CHRNA4P43681 627 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 PSMD8P48556 350 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 OSTNP61366 133 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 NUTF2P61970 127 aaKnown RBP7.24□□□□□ -1.25
HDAC3-216ENST00000523088 GTF2BQ00403 316 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 C1QBPQ07021 282 aaKnown RBP7.24□□□□□ -1.25
HDAC3-216ENST00000523088 CD300CQ08708 224 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 MMRN1Q13201 1228 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 SLC12A1Q13621 1099 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 TFDP2Q14188 446 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 PDK3Q15120 406 aa7.24□□□□□ -1.25
HDAC3-216ENST00000523088 IRF4Q15306 451 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms