RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 FAM129CQ86XR2 697 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 PARP8Q8N3A8 854 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 ZNF784Q8NCA9 323 aaPredicted RBP10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 OR52J3Q8NH60 311 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 APH1BQ8WW43 257 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 PPP1R16AQ96I34 528 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 PITX2Q99697 317 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 RAD21L1Q9H4I0 556 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 RLIMQ9NVW2 624 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 CUEDC1Q9NWM3 386 aaPredicted RBP10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 TAAR2Q9P1P5 351 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 TPRKBQ9Y3C4 175 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 PCDHGB3Q9Y5G1 929 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 XIRP2A4UGR9 3374 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 J3QRK9 145 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 TNFRSF11BO00300 401 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 DPM1O60762 260 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 FADS2O95864 444 aaKnown RBP10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 PCCBP05166 539 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 ACVR2AP27037 513 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 TPP2P29144 1249 aaPredicted RBP10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 CHI3L1P36222 383 aaPredicted RBP10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 PIK3CBP42338 1070 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 FCHO2Q0JRZ9 810 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 LRRC74AQ0VAA2 488 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 C10orf62Q5T681 223 aaPredicted RBP10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 UNC5DQ6UXZ4 953 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 ANKRD13BQ86YJ7 626 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 ENTHD1Q8IYW4 607 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 ZNF540Q8NDQ6 660 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 TFGQ92734 400 aaPredicted RBP10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 COX14Q96I36 57 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 FEVQ99581 238 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 SLC6A16Q9GZN6 736 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 TAS2R9Q9NYW1 312 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 TAC3Q9UHF0 121 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 PCDHGA6Q9Y5G7 932 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 CORINQ9Y5Q5 1042 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 TRPM6Q9BX84 2022 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 COL4A3Q01955 1670 aa10.29□□□□□ -0.76
RAB11FIP1-204ENST00000522774 A0A1W2PRB8 838 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 KLHL33A6NCF5 533 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 C5orf67F2Z3F1 127 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 J3KTA2 159 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 PLPP1O14494 284 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 FAM20BO75063 409 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 VIPP01282 170 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 PSMB5P28074 263 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 PRIM2P49643 509 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 CCR3P51677 355 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 CXCR4P61073 352 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 MOGQ16653 247 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 ZNF829Q3KNS6 432 aaPredicted RBP10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 LCTLQ6UWM7 567 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 SLC9B2Q86UD5 537 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 AMZ2Q86W34 360 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 ADGRF3Q8IZF5 1079 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 SLC5A8Q8N695 610 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 SLC15A4Q8N697 577 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 ANKRD53Q8N9V6 530 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 SETD7Q8WTS6 366 aaKnown RBP10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 RORBQ92753 470 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 BORCS5Q969J3 196 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 ABTB1Q969K4 478 aaPredicted RBP10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 RAD51AP1Q96B01 352 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 SCN3BQ9NY72 215 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 DENND4AQ7Z401 1863 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 TBC1D3BA6NDS4 549 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 CLPXO76031 633 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 RB1P06400 928 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 EPHX1P07099 455 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 KELP23276 732 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 ALDH4A1P30038 563 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 CDH12P55289 794 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 CDK6Q00534 326 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 EIF4HQ15056 248 aaKnown RBP10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 IFI44LQ53G44 452 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 DUS1LQ6P1R4 473 aaKnown RBP10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 SMYD1Q8NB12 490 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 OR4C15Q8NGM1 316 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 GIPC3Q8TF64 312 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 SUSD6Q92537 303 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 DNASE1L2Q92874 299 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 FGF13Q92913 245 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 SMARCD2Q92925 531 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 ZNF717Q9BY31 904 aaPredicted RBP10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 GABARAPL3Q9BY60 117 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 ABCG4Q9H172 646 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 TMEM38AQ9H6F2 299 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 CXorf36Q9H7Y0 433 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 SLAMF7Q9NQ25 335 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 PRSS16Q9NQE7 514 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 RNF6Q9Y252 685 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 CCDC88CQ9P219 2028 aa10.28□□□□□ -0.76
RAB11FIP1-204ENST00000522774 PRAMEF33A0A0G2JMD5 474 aa10.27□□□□□ -0.76
RAB11FIP1-204ENST00000522774 FEZF1A0PJY2 475 aa10.27□□□□□ -0.76
RAB11FIP1-204ENST00000522774 IGLON5A6NGN9 336 aa10.27□□□□□ -0.76
RAB11FIP1-204ENST00000522774 GRXCR1A8MXD5 290 aa10.27□□□□□ -0.76
RAB11FIP1-204ENST00000522774 PRAMEF10O60809 474 aa10.27□□□□□ -0.76
RAB11FIP1-204ENST00000522774 PFDN1O60925 122 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms