RNA–Protein interactions for RNA: ENST00000522468.1

HMBOX1-209, Transcript of homeobox containing 1, humanhuman

TSL 3

Gene HMBOX1, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-209ENST00000522468 THOC6Q86W42 341 aaKnown RBP13.17□□□□□ -0.3
HMBOX1-209ENST00000522468 KLHDC8AQ8IYD2 350 aa13.17□□□□□ -0.3
HMBOX1-209ENST00000522468 PDIK1LQ8N165 341 aa13.17□□□□□ -0.3
HMBOX1-209ENST00000522468 LRRC39Q96DD0 335 aa13.17□□□□□ -0.3
HMBOX1-209ENST00000522468 PTCHD1Q96NR3 888 aa13.17□□□□□ -0.3
HMBOX1-209ENST00000522468 TRIM54Q9BYV2 358 aa13.17□□□□□ -0.3
HMBOX1-209ENST00000522468 TRIM8Q9BZR9 551 aa13.17□□□□□ -0.3
HMBOX1-209ENST00000522468 CHST11Q9NPF2 352 aa13.17□□□□□ -0.3
HMBOX1-209ENST00000522468 DMGDHQ9UI17 866 aaKnown RBP13.17□□□□□ -0.3
HMBOX1-209ENST00000522468 CHMP2BQ9UQN3 213 aa13.17□□□□□ -0.3
HMBOX1-209ENST00000522468 SLC22A14Q9Y267 594 aa13.17□□□□□ -0.3
HMBOX1-209ENST00000522468 NPIPA5E9PKD4 350 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 FAM227AF5H4B4 570 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 ADAM10O14672 748 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 ASNA1O43681 348 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 SLC25A12O75746 678 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 WISP3O95389 354 aaPredicted RBP13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 TBX6O95947 436 aaPredicted RBP13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 SERPIND1P05546 499 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 SERPINA6P08185 405 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 POU3F2P20265 443 aaPredicted RBP13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 MAOAP21397 527 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 ELAVL4P26378 380 aaKnown RBP13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 RPL21P46778 160 aaKnown RBP13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 SLC6A12P48065 614 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 RAB8AP61006 207 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 CDKL1Q00532 357 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 OC90Q02509 493 aaPredicted RBP13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 CBLBQ13191 982 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 ZC3HC1Q86WB0 502 aaKnown RBP13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 CA13Q8N1Q1 262 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 TBC1D19Q8N5T2 526 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 CPSF7Q8N684 471 aaKnown RBP13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 HORMAD2Q8N7B1 307 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 ACBD4Q8NC06 268 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 APCDD1LQ8NCL9 501 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 TRPV3Q8NET8 790 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 CFAP36Q96G28 342 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 RUBCNLQ9H714 662 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 PPANQ9NQ55 473 aaKnown RBP13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 NECTIN3Q9NQS3 549 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 PRDM9Q9NQV7 894 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 MOCS1Q9NZB8 636 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 ZFATQ9P243 1243 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 NPIPA1Q9UND3 350 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 PPIEQ9UNP9 301 aaKnown RBP13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 MEMO1Q9Y316 297 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 ASB1Q9Y576 335 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 ZNF407Q9C0G0 2248 aa13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 SETD2Q9BYW2 2564 aaPredicted RBP13.16□□□□□ -0.3
HMBOX1-209ENST00000522468 ZFHX3Q15911 3703 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 E7ESA3 106 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 TGFBR3LH3BV60 316 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 C19orf84I3L1E1 186 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 ZNHIT1O43257 154 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 MLYCDO95822 493 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 RNH1P13489 461 aaKnown RBP13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 HNF4AP41235 474 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 CYB561P49447 251 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 HLCSP50747 726 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 GPR143P51810 404 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 CASP6P55212 293 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 TAS2R39P59534 338 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 CALCOCO2Q13137 446 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 ZNF460Q14592 562 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 TERF2Q15554 542 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 TMPRSS11BQ86T26 416 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 SCUBE1Q8IWY4 988 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 ZNF295-AS1Q8N0V1 137 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 BBOF1Q8ND07 529 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 ANKRD49Q8WVL7 239 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 MAGED4Q96JG8 741 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 PHF12Q96QT6 1004 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 DMRTA2Q96SC8 542 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 AIF1LQ9BQI0 150 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 WHRNQ9P202 907 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 ZNF223Q9UK11 482 aaPredicted RBP13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 DYRK1BQ9Y463 629 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 KCNE2Q9Y6J6 123 aa13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 V9GYY5 206 aaPredicted RBP13.15□□□□□ -0.3
HMBOX1-209ENST00000522468 NF1P21359 2839 aa13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 ESYT3A0FGR9 886 aa13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 PABPN1LA6NDY0 278 aaKnown RBP13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 NPEPPSL1A6NEC2 478 aa13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 URADA6NGE7 173 aa13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 SEC31AO94979 1220 aaKnown RBP13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 HNRNPH1P31943 449 aaKnown RBP13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 HNMTP50135 292 aa13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 ITGA8P53708 1063 aa13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 HSF1Q00613 529 aa13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 NAA30Q147X3 362 aaPredicted RBP13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 FASTKD3Q14CZ7 662 aaKnown RBP13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 MAPKAPK3Q16644 382 aa13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 SLCO4C1Q6ZQN7 724 aa13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 NCCRP1Q6ZVX7 275 aaPredicted RBP13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 GDF7Q7Z4P5 450 aa13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 DOLPP1Q86YN1 238 aa13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 CEP97Q8IW35 865 aa13.14□□□□□ -0.31
HMBOX1-209ENST00000522468 IFT20Q8IY31 132 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms