RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ZDHHC24Q6UX98 284 aa19.4■□□□□ 0.7
SDCBP-209ENST00000522243 CYS1Q717R9 158 aa19.4■□□□□ 0.7
SDCBP-209ENST00000522243 RPS19BP1Q86WX3 136 aaKnown RBP19.4■□□□□ 0.7
SDCBP-209ENST00000522243 MS4A6EQ96DS6 147 aa19.4■□□□□ 0.7
SDCBP-209ENST00000522243 CAPS2Q9BXY5 557 aa19.4■□□□□ 0.7
SDCBP-209ENST00000522243 RAB17Q9H0T7 212 aa19.4■□□□□ 0.7
SDCBP-209ENST00000522243 GPRC5BQ9NZH0 403 aa19.4■□□□□ 0.7
SDCBP-209ENST00000522243 SEC14L3Q9UDX4 400 aa19.4■□□□□ 0.7
SDCBP-209ENST00000522243 RNF112Q9ULX5 631 aa19.4■□□□□ 0.7
SDCBP-209ENST00000522243 UTP20O75691 2785 aaKnown RBP19.4■□□□□ 0.7
SDCBP-209ENST00000522243 SPTAN1Q13813 2472 aaKnown RBP19.4■□□□□ 0.7
SDCBP-209ENST00000522243 POLEQ07864 2286 aa19.39■□□□□ 0.69
SDCBP-209ENST00000522243 IGKV3D-11A0A0A0MRZ8 115 aa19.39■□□□□ 0.69
SDCBP-209ENST00000522243 A0A1B0GUH1 482 aa19.39■□□□□ 0.69
SDCBP-209ENST00000522243 TCRBV16S1A1N1A0A5B0 115 aa19.39■□□□□ 0.69
SDCBP-209ENST00000522243 ANKDD1BA6NHY2 528 aa19.39■□□□□ 0.69
SDCBP-209ENST00000522243 SAGE2PA6NJ88 616 aa19.39■□□□□ 0.69
SDCBP-209ENST00000522243 CCNT2O60583 730 aaKnown RBP19.39■□□□□ 0.69
SDCBP-209ENST00000522243 STK16O75716 305 aa19.39■□□□□ 0.69
SDCBP-209ENST00000522243 GSTA2P09210 222 aa19.39■□□□□ 0.69
SDCBP-209ENST00000522243 GGT5P36269 586 aa19.39■□□□□ 0.69
SDCBP-209ENST00000522243 DCTP40126 519 aa19.39■□□□□ 0.69
SDCBP-209ENST00000522243 KCNC1P48547 511 aa19.39■□□□□ 0.69
SDCBP-209ENST00000522243 PLA2G16P53816 162 aa19.39■□□□□ 0.69
SDCBP-209ENST00000522243 CAV1Q03135 178 aa19.39■□□□□ 0.69
SDCBP-209ENST00000522243 EFTUD2Q15029 972 aaKnown RBP eCLIP19.39■□□□□ 0.69
SDCBP-209ENST00000522243 XKR6Q5GH73 641 aa19.39■□□□□ 0.69
SDCBP-209ENST00000522243 GRTP1Q5TC63 336 aa19.39■□□□□ 0.69
SDCBP-209ENST00000522243 ZNF468Q5VIY5 522 aaPredicted RBP19.39■□□□□ 0.69
SDCBP-209ENST00000522243 RAPH1Q70E73 1250 aa19.39■□□□□ 0.69
SDCBP-209ENST00000522243 VN1R5Q7Z5H4 357 aa19.39■□□□□ 0.69
SDCBP-209ENST00000522243 CMC1Q7Z7K0 106 aa19.39■□□□□ 0.69
SDCBP-209ENST00000522243 TTLQ8NG68 377 aa19.39■□□□□ 0.69
SDCBP-209ENST00000522243 FBF1Q8TES7 1133 aa19.39■□□□□ 0.69
SDCBP-209ENST00000522243 NT5DC2Q9H857 520 aa19.39■□□□□ 0.69
SDCBP-209ENST00000522243 CNOT10Q9H9A5 744 aaKnown RBP19.39■□□□□ 0.69
SDCBP-209ENST00000522243 ASB1Q9Y576 335 aa19.39■□□□□ 0.69
SDCBP-209ENST00000522243 NAV2Q8IVL1 2488 aa19.39■□□□□ 0.69
SDCBP-209ENST00000522243 PRRC2CQ9Y520 2896 aaKnown RBP19.38■□□□□ 0.69
SDCBP-209ENST00000522243 TRGV8A0A0C4DH27 118 aa19.38■□□□□ 0.69
SDCBP-209ENST00000522243 CLEC3AO75596 197 aa19.38■□□□□ 0.69
SDCBP-209ENST00000522243 TBX6O95947 436 aaPredicted RBP19.38■□□□□ 0.69
SDCBP-209ENST00000522243 S100BP04271 92 aaPredicted RBP19.38■□□□□ 0.69
SDCBP-209ENST00000522243 CD46P15529 392 aa19.38■□□□□ 0.69
SDCBP-209ENST00000522243 DLG1Q12959 904 aa19.38■□□□□ 0.69
SDCBP-209ENST00000522243 DOC2AQ14183 400 aa19.38■□□□□ 0.69
SDCBP-209ENST00000522243 SLMAPQ14BN4 828 aa19.38■□□□□ 0.69
SDCBP-209ENST00000522243 ZRSR2Q15696 482 aaKnown RBP19.38■□□□□ 0.69
SDCBP-209ENST00000522243 ARMC2Q8NEN0 867 aa19.38■□□□□ 0.69
SDCBP-209ENST00000522243 NFAM1Q8NET5 270 aaPredicted RBP19.38■□□□□ 0.69
SDCBP-209ENST00000522243 KIAA1191Q96A73 305 aa19.38■□□□□ 0.69
SDCBP-209ENST00000522243 SCMH1Q96GD3 660 aa19.38■□□□□ 0.69
SDCBP-209ENST00000522243 UBXN10Q96LJ8 280 aa19.38■□□□□ 0.69
SDCBP-209ENST00000522243 ALG9Q9H6U8 611 aa19.38■□□□□ 0.69
SDCBP-209ENST00000522243 PRTFDC1Q9NRG1 225 aa19.38■□□□□ 0.69
SDCBP-209ENST00000522243 LRFN1Q9P244 771 aa19.38■□□□□ 0.69
SDCBP-209ENST00000522243 COPG2Q9UBF2 871 aa19.38■□□□□ 0.69
SDCBP-209ENST00000522243 SH3BGRL2Q9UJC5 107 aa19.38■□□□□ 0.69
SDCBP-209ENST00000522243 PTBP2Q9UKA9 531 aaKnown RBP19.38■□□□□ 0.69
SDCBP-209ENST00000522243 ZNF490Q9ULM2 529 aaPredicted RBP19.38■□□□□ 0.69
SDCBP-209ENST00000522243 B3GALT2O43825 422 aa19.37■□□□□ 0.69
SDCBP-209ENST00000522243 CD22P20273 847 aa19.37■□□□□ 0.69
SDCBP-209ENST00000522243 TPP2P29144 1249 aaPredicted RBP19.37■□□□□ 0.69
SDCBP-209ENST00000522243 EEF1DP29692 281 aaKnown RBP19.37■□□□□ 0.69
SDCBP-209ENST00000522243 HNRNPFP52597 415 aaKnown RBP19.37■□□□□ 0.69
SDCBP-209ENST00000522243 SLC7A5Q01650 507 aa19.37■□□□□ 0.69
SDCBP-209ENST00000522243 PDK4Q16654 411 aa19.37■□□□□ 0.69
SDCBP-209ENST00000522243 CDKL4Q5MAI5 379 aa19.37■□□□□ 0.69
SDCBP-209ENST00000522243 GALNTL5Q7Z4T8 443 aa19.37■□□□□ 0.69
SDCBP-209ENST00000522243 FAM47BQ8NA70 645 aa19.37■□□□□ 0.69
SDCBP-209ENST00000522243 PDPRQ8NCN5 879 aa19.37■□□□□ 0.69
SDCBP-209ENST00000522243 TMEM52Q8NDY8 209 aa19.37■□□□□ 0.69
SDCBP-209ENST00000522243 MRRFQ96E11 262 aaKnown RBP19.37■□□□□ 0.69
SDCBP-209ENST00000522243 PTCD3Q96EY7 689 aaKnown RBP19.37■□□□□ 0.69
SDCBP-209ENST00000522243 QRFPRQ96P65 431 aa19.37■□□□□ 0.69
SDCBP-209ENST00000522243 REXO4Q9GZR2 422 aaKnown RBP19.37■□□□□ 0.69
SDCBP-209ENST00000522243 TSPAN10Q9H1Z9 355 aaPredicted RBP19.37■□□□□ 0.69
SDCBP-209ENST00000522243 PRM3Q9NNZ6 103 aa19.37■□□□□ 0.69
SDCBP-209ENST00000522243 PNO1Q9NRX1 252 aaKnown RBP19.37■□□□□ 0.69
SDCBP-209ENST00000522243 MMACHCQ9Y4U1 282 aa19.37■□□□□ 0.69
SDCBP-209ENST00000522243 DIDO1Q9BTC0 2240 aaKnown RBP19.37■□□□□ 0.69
SDCBP-209ENST00000522243 ESYT3A0FGR9 886 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 SUPT3HB4E1H0 165 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 TGFBR3LH3BV60 316 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 SUPT3HO75486 399 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 NEURL1O76050 574 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 SLC35E2BP0CK96 405 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 EPORP19235 508 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 TFEBP19484 476 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 CERS1P27544 350 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 GSTM2P28161 218 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 PPP2R1BP30154 601 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 STX2P32856 288 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 RAB38P57729 211 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 IRF8Q02556 426 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 CHIT1Q13231 466 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 SLC25A25Q6KCM7 469 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 TRIM40Q6P9F5 258 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 ISCA2Q86U28 154 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 LGI4Q8N135 537 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms