RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 CAMK2GQ13555 558 aaPredicted RBP11.59□□□□□ -0.55
SPIDR-217ENST00000522117 P2RY14Q15391 338 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 ZNF789Q5FWF6 425 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 CELF3Q5SZQ8 465 aaKnown RBP11.59□□□□□ -0.55
SPIDR-217ENST00000522117 HES5Q5TA89 166 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 BCL2L15Q5TBC7 163 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 GPR153Q6NV75 609 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 PKN3Q6P5Z2 889 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 TMEM207Q6UWW9 146 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 ISCA2Q86U28 154 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 NPAS4Q8IUM7 802 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 MCATQ8IVS2 390 aaKnown RBP11.59□□□□□ -0.55
SPIDR-217ENST00000522117 ZNF527Q8NB42 609 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 OR2T11Q8NH01 316 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 SFT2D1Q8WV19 159 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 POF1BQ8WVV4 589 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 PRMT6Q96LA8 375 aaPredicted RBP11.59□□□□□ -0.55
SPIDR-217ENST00000522117 CCDC17Q96LX7 622 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 C10orf90Q96M02 699 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 POLR3FQ9H1D9 316 aaPredicted RBP11.59□□□□□ -0.55
SPIDR-217ENST00000522117 ZNF275Q9NSD4 429 aaPredicted RBP11.59□□□□□ -0.55
SPIDR-217ENST00000522117 PPIEQ9UNP9 301 aaKnown RBP11.59□□□□□ -0.55
SPIDR-217ENST00000522117 CBY1Q9Y3M2 126 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 CFAP20Q9Y6A4 193 aaKnown RBP11.59□□□□□ -0.55
SPIDR-217ENST00000522117 TTLL8A6PVC2 850 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 ISM1B1AKI9 464 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 G3V3Q6 166 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 TEX46H3BTG2 121 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 DIRAS1O95057 198 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 CDRT1O95170 752 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 GABRB1P18505 474 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 HNRNPA0Q13151 305 aaKnown RBP11.59□□□□□ -0.55
SPIDR-217ENST00000522117 SERTAD2Q14140 314 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 FGL2Q14314 439 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 TEAD4Q15561 434 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 PAN3Q58A45 887 aaKnown RBP11.59□□□□□ -0.55
SPIDR-217ENST00000522117 XKR7Q5GH72 579 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 ESRP1Q6NXG1 681 aaKnown RBP11.59□□□□□ -0.55
SPIDR-217ENST00000522117 RHOUQ7L0Q8 258 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 OTOP2Q7RTS6 562 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 KRT74Q7RTS7 529 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 LUZP2Q86TE4 346 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 PTGR2Q8N8N7 351 aaPredicted RBP11.59□□□□□ -0.55
SPIDR-217ENST00000522117 GMCL1P1Q8NEA9 526 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 C9orf43Q8TAL5 461 aaPredicted RBP11.59□□□□□ -0.55
SPIDR-217ENST00000522117 ELP4Q96EB1 424 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 MRPS24Q96EL2 167 aaKnown RBP11.59□□□□□ -0.55
SPIDR-217ENST00000522117 SCMH1Q96GD3 660 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 TRMT2BQ96GJ1 504 aaKnown RBP11.59□□□□□ -0.55
SPIDR-217ENST00000522117 KCNC2Q96PR1 638 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 CCM2Q9BSQ5 444 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 H2AFJQ9BTM1 129 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 MND1Q9BWT6 205 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 CDCA4Q9BXL8 241 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 GABARAPL3Q9BY60 117 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 TDRD3Q9H7E2 651 aaKnown RBP11.59□□□□□ -0.55
SPIDR-217ENST00000522117 NT5DC2Q9H857 520 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 RGS18Q9NS28 235 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 ZNF226Q9NYT6 803 aa11.59□□□□□ -0.55
SPIDR-217ENST00000522117 LCHNA4D1U4 455 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 DDTLA6NHG4 134 aaPredicted RBP11.58□□□□□ -0.56
SPIDR-217ENST00000522117 IGHV2-70P01814 119 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 RLN2P04090 185 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 PFKMP08237 780 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 SMIM6P0DI80 62 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 POU3F2P20265 443 aaPredicted RBP11.58□□□□□ -0.56
SPIDR-217ENST00000522117 DNASE1P24855 282 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 CRKP46108 304 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 DCDC1P59894 354 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 LRRC32Q14392 662 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 TKFCQ3LXA3 575 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 DDI2Q5TDH0 399 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 SLFN12LQ6IEE8 588 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 NOTUMQ6P988 496 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 SCIMPQ6UWF3 145 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 TMEM179Q6ZVK1 233 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 HSD17B13Q7Z5P4 300 aaPredicted RBP11.58□□□□□ -0.56
SPIDR-217ENST00000522117 MSRB3Q8IXL7 192 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 ADGRF3Q8IZF5 1079 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 TBC1D19Q8N5T2 526 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 NKAIN3Q8N8D7 197 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 RNF139Q8WU17 664 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 RAD51AP1Q96B01 352 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 LRRC46Q96FV0 321 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 TREX2Q9BQ50 279 aaPredicted RBP11.58□□□□□ -0.56
SPIDR-217ENST00000522117 THUMPD3Q9BV44 507 aaKnown RBP11.58□□□□□ -0.56
SPIDR-217ENST00000522117 PAPOLGQ9BWT3 736 aaKnown RBP11.58□□□□□ -0.56
SPIDR-217ENST00000522117 KCNH6Q9H252 994 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 ACTL8Q9H568 366 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 EQTNQ9NQ60 294 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 DNAJC11Q9NVH1 559 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 GPR160Q9UJ42 338 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 PAGE1O75459 146 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 STBD1O95210 358 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 SCG5P05408 212 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 SYPP08247 313 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 RHCEP18577 417 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 HOXC12P31275 282 aa11.58□□□□□ -0.56
SPIDR-217ENST00000522117 ATP5C1P36542 298 aaKnown RBP11.58□□□□□ -0.56
SPIDR-217ENST00000522117 SOX3P41225 446 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms