RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 CELA2AP08217 269 aa19.44■□□□□ 0.7
TRIM35-203ENST00000521253 PRR35P0CG20 571 aa19.44■□□□□ 0.7
TRIM35-203ENST00000521253 RNH1P13489 461 aaKnown RBP19.44■□□□□ 0.7
TRIM35-203ENST00000521253 JAK1P23458 1154 aa19.44■□□□□ 0.7
TRIM35-203ENST00000521253 CD97P48960 835 aa19.44■□□□□ 0.7
TRIM35-203ENST00000521253 RUNX2Q13950 521 aa19.44■□□□□ 0.7
TRIM35-203ENST00000521253 ABRAXAS2Q15018 415 aa19.44■□□□□ 0.7
TRIM35-203ENST00000521253 NSDHLQ15738 373 aa19.44■□□□□ 0.7
TRIM35-203ENST00000521253 AGAP7PQ5VUJ5 663 aa19.44■□□□□ 0.7
TRIM35-203ENST00000521253 LIPJQ5W064 366 aa19.44■□□□□ 0.7
TRIM35-203ENST00000521253 TRIM40Q6P9F5 258 aa19.44■□□□□ 0.7
TRIM35-203ENST00000521253 ABHD17CQ6PCB6 329 aa19.44■□□□□ 0.7
TRIM35-203ENST00000521253 IGFL3Q6UXB1 125 aa19.44■□□□□ 0.7
TRIM35-203ENST00000521253 CPEB2Q7Z5Q1 589 aaKnown RBP19.44■□□□□ 0.7
TRIM35-203ENST00000521253 IMMP1LQ96LU5 166 aa19.44■□□□□ 0.7
TRIM35-203ENST00000521253 AGAP4Q96P64 663 aa19.44■□□□□ 0.7
TRIM35-203ENST00000521253 QRFPRQ96P65 431 aa19.44■□□□□ 0.7
TRIM35-203ENST00000521253 TUBB6Q9BUF5 446 aa19.44■□□□□ 0.7
TRIM35-203ENST00000521253 MS4A8Q9BY19 250 aa19.44■□□□□ 0.7
TRIM35-203ENST00000521253 PRM3Q9NNZ6 103 aa19.44■□□□□ 0.7
TRIM35-203ENST00000521253 TMEM216Q9P0N5 145 aa19.44■□□□□ 0.7
TRIM35-203ENST00000521253 A0A088AWK7 358 aa19.43■□□□□ 0.7
TRIM35-203ENST00000521253 MAGEB17A8MXT2 336 aa19.43■□□□□ 0.7
TRIM35-203ENST00000521253 FAM227AF5H4B4 570 aa19.43■□□□□ 0.7
TRIM35-203ENST00000521253 GOLGA8RI6L899 631 aa19.43■□□□□ 0.7
TRIM35-203ENST00000521253 PSMD12O00232 456 aaPredicted RBP19.43■□□□□ 0.7
TRIM35-203ENST00000521253 UGDHO60701 494 aa19.43■□□□□ 0.7
TRIM35-203ENST00000521253 SEC24DO94855 1032 aaPredicted RBP19.43■□□□□ 0.7
TRIM35-203ENST00000521253 ZNF10P21506 573 aaPredicted RBP19.43■□□□□ 0.7
TRIM35-203ENST00000521253 JMJD6Q6NYC1 403 aaPredicted RBP19.43■□□□□ 0.7
TRIM35-203ENST00000521253 UBE3DQ7Z6J8 389 aa19.43■□□□□ 0.7
TRIM35-203ENST00000521253 ACMSDQ8TDX5 336 aa19.43■□□□□ 0.7
TRIM35-203ENST00000521253 WDR77Q9BQA1 342 aaPredicted RBP19.43■□□□□ 0.7
TRIM35-203ENST00000521253 NPLQ9BXD5 320 aaPredicted RBP19.43■□□□□ 0.7
TRIM35-203ENST00000521253 NOL11Q9H8H0 719 aaKnown RBP19.43■□□□□ 0.7
TRIM35-203ENST00000521253 PCTPQ9UKL6 214 aa19.43■□□□□ 0.7
TRIM35-203ENST00000521253 OR7A17O14581 309 aa19.42■□□□□ 0.7
TRIM35-203ENST00000521253 B3GALT2O43825 422 aa19.42■□□□□ 0.7
TRIM35-203ENST00000521253 SH3BGRLO75368 114 aa19.42■□□□□ 0.7
TRIM35-203ENST00000521253 PYGBP11216 843 aa19.42■□□□□ 0.7
TRIM35-203ENST00000521253 CERS1P27544 350 aa19.42■□□□□ 0.7
TRIM35-203ENST00000521253 SERPINB1P30740 379 aa19.42■□□□□ 0.7
TRIM35-203ENST00000521253 SLCO1A2P46721 670 aa19.42■□□□□ 0.7
TRIM35-203ENST00000521253 BTG2P78543 158 aa19.42■□□□□ 0.7
TRIM35-203ENST00000521253 TGM3Q08188 693 aa19.42■□□□□ 0.7
TRIM35-203ENST00000521253 DDX39BQ13838 428 aaKnown RBP19.42■□□□□ 0.7
TRIM35-203ENST00000521253 SLC6A19Q695T7 634 aa19.42■□□□□ 0.7
TRIM35-203ENST00000521253 RIPOR1Q6ZS17 1223 aa19.42■□□□□ 0.7
TRIM35-203ENST00000521253 LCA5Q86VQ0 697 aa19.42■□□□□ 0.7
TRIM35-203ENST00000521253 CNPY4Q8N129 248 aa19.42■□□□□ 0.7
TRIM35-203ENST00000521253 RNF175Q8N4F7 328 aa19.42■□□□□ 0.7
TRIM35-203ENST00000521253 L3MBTL4Q8NA19 623 aa19.42■□□□□ 0.7
TRIM35-203ENST00000521253 OR52B6Q8NGF0 335 aa19.42■□□□□ 0.7
TRIM35-203ENST00000521253 HUS1BQ8NHY5 278 aa19.42■□□□□ 0.7
TRIM35-203ENST00000521253 BRIX1Q8TDN6 353 aaKnown RBP19.42■□□□□ 0.7
TRIM35-203ENST00000521253 PSMF1Q92530 271 aa19.42■□□□□ 0.7
TRIM35-203ENST00000521253 TM9SF4Q92544 642 aa19.42■□□□□ 0.7
TRIM35-203ENST00000521253 PTCHD1Q96NR3 888 aa19.42■□□□□ 0.7
TRIM35-203ENST00000521253 NSUN5Q96P11 429 aaKnown RBP19.42■□□□□ 0.7
TRIM35-203ENST00000521253 KCNC2Q96PR1 638 aa19.42■□□□□ 0.7
TRIM35-203ENST00000521253 CDK15Q96Q40 435 aa19.42■□□□□ 0.7
TRIM35-203ENST00000521253 SERINC2Q96SA4 455 aa19.42■□□□□ 0.7
TRIM35-203ENST00000521253 PRDM7Q9NQW5 492 aa19.42■□□□□ 0.7
TRIM35-203ENST00000521253 LUZP4Q9P127 313 aa19.42■□□□□ 0.7
TRIM35-203ENST00000521253 RNF11Q9Y3C5 154 aa19.42■□□□□ 0.7
TRIM35-203ENST00000521253 A8MT66 165 aa19.41■□□□□ 0.7
TRIM35-203ENST00000521253 FOXO6A8MYZ6 492 aa19.41■□□□□ 0.7
TRIM35-203ENST00000521253 H0YIV9 168 aa19.41■□□□□ 0.7
TRIM35-203ENST00000521253 PRMT3O60678 531 aa19.41■□□□□ 0.7
TRIM35-203ENST00000521253 SORBS2O94875 1100 aaKnown RBP19.41■□□□□ 0.7
TRIM35-203ENST00000521253 TGFB1P01137 390 aa19.41■□□□□ 0.7
TRIM35-203ENST00000521253 HSD17B3P37058 310 aa19.41■□□□□ 0.7
TRIM35-203ENST00000521253 PIK3CBP42338 1070 aa19.41■□□□□ 0.7
TRIM35-203ENST00000521253 MTTPP55157 894 aa19.41■□□□□ 0.7
TRIM35-203ENST00000521253 CPSF6Q16630 551 aaKnown RBP eCLIP19.41■□□□□ 0.7
TRIM35-203ENST00000521253 TMEM35AQ53FP2 167 aa19.41■□□□□ 0.7
TRIM35-203ENST00000521253 SFT2D3Q587I9 215 aa19.41■□□□□ 0.7
TRIM35-203ENST00000521253 IGFL2Q6UWQ7 119 aa19.41■□□□□ 0.7
TRIM35-203ENST00000521253 QSOX2Q6ZRP7 698 aa19.41■□□□□ 0.7
TRIM35-203ENST00000521253 CHSY3Q70JA7 882 aa19.41■□□□□ 0.7
TRIM35-203ENST00000521253 ZADH2Q8N4Q0 377 aa19.41■□□□□ 0.7
TRIM35-203ENST00000521253 Q8NA96 180 aa19.41■□□□□ 0.7
TRIM35-203ENST00000521253 ATP6V1E2Q96A05 226 aa19.41■□□□□ 0.7
TRIM35-203ENST00000521253 PNPLA2Q96AD5 504 aa19.41■□□□□ 0.7
TRIM35-203ENST00000521253 CMTM7Q96FZ5 175 aa19.41■□□□□ 0.7
TRIM35-203ENST00000521253 OR51B5Q9H339 312 aa19.41■□□□□ 0.7
TRIM35-203ENST00000521253 COPS7BQ9H9Q2 264 aaPredicted RBP19.41■□□□□ 0.7
TRIM35-203ENST00000521253 PPCSQ9HAB8 311 aa19.41■□□□□ 0.7
TRIM35-203ENST00000521253 ZBTB26Q9HCK0 441 aa19.41■□□□□ 0.7
TRIM35-203ENST00000521253 DMRT3Q9NQL9 472 aa19.41■□□□□ 0.7
TRIM35-203ENST00000521253 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.41■□□□□ 0.7
TRIM35-203ENST00000521253 ADGRE2Q9UHX3 823 aa19.41■□□□□ 0.7
TRIM35-203ENST00000521253 TSC22D4Q9Y3Q8 395 aa19.41■□□□□ 0.7
TRIM35-203ENST00000521253 PCDHGA11Q9Y5H2 935 aa19.41■□□□□ 0.7
TRIM35-203ENST00000521253 V9GYY5 206 aaPredicted RBP19.41■□□□□ 0.7
TRIM35-203ENST00000521253 NBASA2RRP1 2371 aa19.41■□□□□ 0.7
TRIM35-203ENST00000521253 MYO18BQ8IUG5 2567 aa19.4■□□□□ 0.7
TRIM35-203ENST00000521253 DOCK10Q96BY6 2186 aa19.4■□□□□ 0.7
TRIM35-203ENST00000521253 A0A1W2PPM1 405 aa19.4■□□□□ 0.7
TRIM35-203ENST00000521253 SMIM23A6NLE4 172 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms