RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 NIPAL1Q6NVV3 410 aa18.95■□□□□ 0.62
PABPC1-217ENST00000521067 GHDCQ8N2G8 530 aa18.95■□□□□ 0.62
PABPC1-217ENST00000521067 ANKRD49Q8WVL7 239 aa18.95■□□□□ 0.62
PABPC1-217ENST00000521067 DMRTA2Q96SC8 542 aa18.95■□□□□ 0.62
PABPC1-217ENST00000521067 AIF1LQ9BQI0 150 aa18.95■□□□□ 0.62
PABPC1-217ENST00000521067 ZNF223Q9UK11 482 aaPredicted RBP18.95■□□□□ 0.62
PABPC1-217ENST00000521067 HRH3Q9Y5N1 445 aa18.95■□□□□ 0.62
PABPC1-217ENST00000521067 CACNA1CQ13936 2221 aa18.94■□□□□ 0.62
PABPC1-217ENST00000521067 TGFBR3LH3BV60 316 aa18.94■□□□□ 0.62
PABPC1-217ENST00000521067 ABOP16442 354 aa18.94■□□□□ 0.62
PABPC1-217ENST00000521067 PPP2R1BP30154 601 aa18.94■□□□□ 0.62
PABPC1-217ENST00000521067 RFC3P40938 356 aa18.94■□□□□ 0.62
PABPC1-217ENST00000521067 NR0B1P51843 470 aaKnown RBP18.94■□□□□ 0.62
PABPC1-217ENST00000521067 HNRNPFP52597 415 aaKnown RBP18.94■□□□□ 0.62
PABPC1-217ENST00000521067 TAS2R39P59534 338 aa18.94■□□□□ 0.62
PABPC1-217ENST00000521067 KRTAP10-9P60411 292 aa18.94■□□□□ 0.62
PABPC1-217ENST00000521067 BTN3A2P78410 334 aa18.94■□□□□ 0.62
PABPC1-217ENST00000521067 ZC3HC1Q86WB0 502 aaKnown RBP18.94■□□□□ 0.62
PABPC1-217ENST00000521067 SULF2Q8IWU5 870 aa18.94■□□□□ 0.62
PABPC1-217ENST00000521067 PDIK1LQ8N165 341 aa18.94■□□□□ 0.62
PABPC1-217ENST00000521067 FAM98AQ8NCA5 519 aaKnown RBP18.94■□□□□ 0.62
PABPC1-217ENST00000521067 TMEM52Q8NDY8 209 aa18.94■□□□□ 0.62
PABPC1-217ENST00000521067 DEFB126Q9BYW3 111 aa18.94■□□□□ 0.62
PABPC1-217ENST00000521067 KCNE2Q9Y6J6 123 aa18.94■□□□□ 0.62
PABPC1-217ENST00000521067 A0A0G2JN53 185 aa18.93■□□□□ 0.62
PABPC1-217ENST00000521067 PSMD12O00232 456 aaPredicted RBP18.93■□□□□ 0.62
PABPC1-217ENST00000521067 TBX6O95947 436 aaPredicted RBP18.93■□□□□ 0.62
PABPC1-217ENST00000521067 GPR143P51810 404 aa18.93■□□□□ 0.62
PABPC1-217ENST00000521067 MORF4L2Q15014 288 aa18.93■□□□□ 0.62
PABPC1-217ENST00000521067 SLCO4C1Q6ZQN7 724 aa18.93■□□□□ 0.62
PABPC1-217ENST00000521067 MDGA2Q7Z553 956 aa18.93■□□□□ 0.62
PABPC1-217ENST00000521067 ANKMY2Q8IV38 441 aa18.93■□□□□ 0.62
PABPC1-217ENST00000521067 CEP97Q8IW35 865 aa18.93■□□□□ 0.62
PABPC1-217ENST00000521067 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.93■□□□□ 0.62
PABPC1-217ENST00000521067 B3GNT7Q8NFL0 401 aa18.93■□□□□ 0.62
PABPC1-217ENST00000521067 PDLIM2Q96JY6 352 aa18.93■□□□□ 0.62
PABPC1-217ENST00000521067 GPAMQ9HCL2 828 aa18.93■□□□□ 0.62
PABPC1-217ENST00000521067 OARD1Q9Y530 152 aa18.93■□□□□ 0.62
PABPC1-217ENST00000521067 TRBV11-1A0A0K0K1C0 115 aa18.92■□□□□ 0.62
PABPC1-217ENST00000521067 URADA6NGE7 173 aa18.92■□□□□ 0.62
PABPC1-217ENST00000521067 E9PLN8 166 aa18.92■□□□□ 0.62
PABPC1-217ENST00000521067 PRKNO60260 465 aaPredicted RBP18.92■□□□□ 0.62
PABPC1-217ENST00000521067 MYO1DO94832 1006 aa18.92■□□□□ 0.62
PABPC1-217ENST00000521067 C1GALT1C1LP0DN25 315 aa18.92■□□□□ 0.62
PABPC1-217ENST00000521067 HNRNPH1P31943 449 aaKnown RBP18.92■□□□□ 0.62
PABPC1-217ENST00000521067 MEOX1P50221 254 aa18.92■□□□□ 0.62
PABPC1-217ENST00000521067 CDKL1Q00532 357 aa18.92■□□□□ 0.62
PABPC1-217ENST00000521067 FRG1Q14331 258 aaKnown RBP18.92■□□□□ 0.62
PABPC1-217ENST00000521067 FASTKD3Q14CZ7 662 aaKnown RBP18.92■□□□□ 0.62
PABPC1-217ENST00000521067 TSNQ15631 228 aaKnown RBP18.92■□□□□ 0.62
PABPC1-217ENST00000521067 C16orf47Q6ZP98 133 aaPredicted RBP18.92■□□□□ 0.62
PABPC1-217ENST00000521067 SCUBE1Q8IWY4 988 aa18.92■□□□□ 0.62
PABPC1-217ENST00000521067 ANKRD7Q92527 254 aa18.92■□□□□ 0.62
PABPC1-217ENST00000521067 TMEM125Q96AQ2 219 aa18.92■□□□□ 0.62
PABPC1-217ENST00000521067 VKORC1Q9BQB6 163 aa18.92■□□□□ 0.62
PABPC1-217ENST00000521067 MOCS1Q9NZB8 636 aa18.92■□□□□ 0.62
PABPC1-217ENST00000521067 PPIEQ9UNP9 301 aaKnown RBP18.92■□□□□ 0.62
PABPC1-217ENST00000521067 A0A1B0GTH9 108 aa18.91■□□□□ 0.62
PABPC1-217ENST00000521067 FAM95CA0A1B0GW59 222 aa18.91■□□□□ 0.62
PABPC1-217ENST00000521067 LRIT2A6NDA9 550 aa18.91■□□□□ 0.62
PABPC1-217ENST00000521067 TMEM200CA6NKL6 621 aa18.91■□□□□ 0.62
PABPC1-217ENST00000521067 PRAMEF4O60810 478 aa18.91■□□□□ 0.62
PABPC1-217ENST00000521067 PIAS1O75925 651 aa18.91■□□□□ 0.62
PABPC1-217ENST00000521067 SLC6A12P48065 614 aa18.91■□□□□ 0.62
PABPC1-217ENST00000521067 CLCN2P51788 898 aa18.91■□□□□ 0.62
PABPC1-217ENST00000521067 MGAT5Q09328 741 aa18.91■□□□□ 0.62
PABPC1-217ENST00000521067 CMPK2Q5EBM0 449 aa18.91■□□□□ 0.62
PABPC1-217ENST00000521067 PRAMEF9Q5VWM5 478 aa18.91■□□□□ 0.62
PABPC1-217ENST00000521067 VN1R5Q7Z5H4 357 aa18.91■□□□□ 0.62
PABPC1-217ENST00000521067 KLHL7Q8IXQ5 586 aa18.91■□□□□ 0.62
PABPC1-217ENST00000521067 KLHDC8AQ8IYD2 350 aa18.91■□□□□ 0.62
PABPC1-217ENST00000521067 NKAPQ8N5F7 415 aaKnown RBP18.91■□□□□ 0.62
PABPC1-217ENST00000521067 ACBD4Q8NC06 268 aa18.91■□□□□ 0.62
PABPC1-217ENST00000521067 PHF10Q8WUB8 498 aaKnown RBP18.91■□□□□ 0.62
PABPC1-217ENST00000521067 RHBDF1Q96CC6 855 aa18.91■□□□□ 0.62
PABPC1-217ENST00000521067 LRRC39Q96DD0 335 aa18.91■□□□□ 0.62
PABPC1-217ENST00000521067 MS4A6EQ96DS6 147 aa18.91■□□□□ 0.62
PABPC1-217ENST00000521067 QRFPRQ96P65 431 aa18.91■□□□□ 0.62
PABPC1-217ENST00000521067 EGFL8Q99944 293 aa18.91■□□□□ 0.62
PABPC1-217ENST00000521067 MCMBPQ9BTE3 642 aa18.91■□□□□ 0.62
PABPC1-217ENST00000521067 LIN28AQ9H9Z2 209 aaKnown RBP18.91■□□□□ 0.62
PABPC1-217ENST00000521067 PNO1Q9NRX1 252 aaKnown RBP18.91■□□□□ 0.62
PABPC1-217ENST00000521067 TRMT1Q9NXH9 659 aaKnown RBP18.91■□□□□ 0.62
PABPC1-217ENST00000521067 FBXW2Q9UKT8 454 aa18.91■□□□□ 0.62
PABPC1-217ENST00000521067 MMACHCQ9Y4U1 282 aa18.91■□□□□ 0.62
PABPC1-217ENST00000521067 FCHO1O14526 889 aa18.9■□□□□ 0.62
PABPC1-217ENST00000521067 PRRG2O14669 202 aa18.9■□□□□ 0.62
PABPC1-217ENST00000521067 PEX1O43933 1283 aa18.9■□□□□ 0.62
PABPC1-217ENST00000521067 HS6ST1O60243 411 aa18.9■□□□□ 0.62
PABPC1-217ENST00000521067 ITGA10O75578 1167 aa18.9■□□□□ 0.62
PABPC1-217ENST00000521067 WDR47O94967 919 aa18.9■□□□□ 0.62
PABPC1-217ENST00000521067 SLBPQ14493 270 aaKnown RBP eCLIP18.9■□□□□ 0.62
PABPC1-217ENST00000521067 ADNP2Q6IQ32 1131 aa18.9■□□□□ 0.62
PABPC1-217ENST00000521067 SPATA6LQ8N4H0 392 aa18.9■□□□□ 0.62
PABPC1-217ENST00000521067 MARVELD2Q8N4S9 558 aa18.9■□□□□ 0.62
PABPC1-217ENST00000521067 ARMC2Q8NEN0 867 aa18.9■□□□□ 0.62
PABPC1-217ENST00000521067 C16orf52Q8NHV5 167 aa18.9■□□□□ 0.62
PABPC1-217ENST00000521067 SMYD2Q9NRG4 433 aa18.9■□□□□ 0.62
PABPC1-217ENST00000521067 ZFHX3Q15911 3703 aa18.89■□□□□ 0.62
PABPC1-217ENST00000521067 TAPBPO15533 448 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms