RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	MED27	Q6P2C8	311 aa		22.75	■■□□□ 1.23
CNOT7-204	ENST00000518885	PAPD4	Q6PIY7	484 aa	Known RBP	22.75	■■□□□ 1.23
CNOT7-204	ENST00000518885	TRMT10C	Q7L0Y3	403 aa	Known RBP	22.75	■■□□□ 1.23
CNOT7-204	ENST00000518885	CISD2	Q8N5K1	135 aa	Known RBP	22.75	■■□□□ 1.23
CNOT7-204	ENST00000518885	PSMF1	Q92530	271 aa		22.75	■■□□□ 1.23
CNOT7-204	ENST00000518885	HAS2	Q92819	552 aa		22.75	■■□□□ 1.23
CNOT7-204	ENST00000518885	SNRNP40	Q96DI7	357 aa	Known RBP	22.75	■■□□□ 1.23
CNOT7-204	ENST00000518885	PTCHD1	Q96NR3	888 aa		22.75	■■□□□ 1.23
CNOT7-204	ENST00000518885	CENPK	Q9BS16	269 aa		22.75	■■□□□ 1.23
CNOT7-204	ENST00000518885	MMACHC	Q9Y4U1	282 aa		22.75	■■□□□ 1.23
CNOT7-204	ENST00000518885	TRAV17	A0A0B4J275	112 aa		22.74	■■□□□ 1.23
CNOT7-204	ENST00000518885	HMX2	A2RU54	273 aa		22.74	■■□□□ 1.23
CNOT7-204	ENST00000518885	CLDN4	O14493	209 aa		22.74	■■□□□ 1.23
CNOT7-204	ENST00000518885	ITGAM	P11215	1152 aa		22.74	■■□□□ 1.23
CNOT7-204	ENST00000518885	COL6A2	P12110	1019 aa		22.74	■■□□□ 1.23
CNOT7-204	ENST00000518885	ECHS1	P30084	290 aa		22.74	■■□□□ 1.23
CNOT7-204	ENST00000518885	PHEX	P78562	749 aa		22.74	■■□□□ 1.23
CNOT7-204	ENST00000518885	IRF9	Q00978	393 aa		22.74	■■□□□ 1.23
CNOT7-204	ENST00000518885	PCDH1	Q08174	1060 aa		22.74	■■□□□ 1.23
CNOT7-204	ENST00000518885	UBAP2L	Q14157	1087 aa	Known RBP	22.74	■■□□□ 1.23
CNOT7-204	ENST00000518885	ELOA	Q14241	798 aa	Known RBP	22.74	■■□□□ 1.23
CNOT7-204	ENST00000518885	NAA30	Q147X3	362 aa	Predicted RBP	22.74	■■□□□ 1.23
CNOT7-204	ENST00000518885	SETDB1	Q15047	1291 aa		22.74	■■□□□ 1.23
CNOT7-204	ENST00000518885	INA	Q16352	499 aa		22.74	■■□□□ 1.23
CNOT7-204	ENST00000518885	ADPRM	Q3LIE5	342 aa		22.74	■■□□□ 1.23
CNOT7-204	ENST00000518885	TMEM35A	Q53FP2	167 aa		22.74	■■□□□ 1.23
CNOT7-204	ENST00000518885	RPUSD3	Q6P087	351 aa	Known RBP	22.74	■■□□□ 1.23
CNOT7-204	ENST00000518885	FAM26E	Q8N5C1	309 aa		22.74	■■□□□ 1.23
CNOT7-204	ENST00000518885	REPS1	Q96D71	796 aa		22.74	■■□□□ 1.23
CNOT7-204	ENST00000518885	KCNC2	Q96PR1	638 aa		22.74	■■□□□ 1.23
CNOT7-204	ENST00000518885	SERINC2	Q96SA4	455 aa		22.74	■■□□□ 1.23
CNOT7-204	ENST00000518885	KCNK13	Q9HB14	408 aa		22.74	■■□□□ 1.23
CNOT7-204	ENST00000518885	MMP25	Q9NPA2	562 aa		22.74	■■□□□ 1.23
CNOT7-204	ENST00000518885	ASH1L	Q9NR48	2969 aa	Known RBP	22.74	■■□□□ 1.23
CNOT7-204	ENST00000518885	SPACA6	W5XKT8	324 aa		22.74	■■□□□ 1.23
CNOT7-204	ENST00000518885	IGHV3-20	A0A0C4DH32	117 aa		22.73	■■□□□ 1.23
CNOT7-204	ENST00000518885	EXOC1L	A0A1B0GW35	172 aa		22.73	■■□□□ 1.23
CNOT7-204	ENST00000518885	POC1B-GALNT4	F8VUJ3	575 aa		22.73	■■□□□ 1.23
CNOT7-204	ENST00000518885	ABHD2	P08910	425 aa		22.73	■■□□□ 1.23
CNOT7-204	ENST00000518885	HNRNPH1	P31943	449 aa	Known RBP	22.73	■■□□□ 1.23
CNOT7-204	ENST00000518885	EFNA3	P52797	238 aa		22.73	■■□□□ 1.23
CNOT7-204	ENST00000518885	MTTP	P55157	894 aa		22.73	■■□□□ 1.23
CNOT7-204	ENST00000518885	ZNF33B	Q06732	778 aa		22.73	■■□□□ 1.23
CNOT7-204	ENST00000518885	E2F2	Q14209	437 aa		22.73	■■□□□ 1.23
CNOT7-204	ENST00000518885	PFKFB4	Q16877	469 aa		22.73	■■□□□ 1.23
CNOT7-204	ENST00000518885	PRR30	Q53SZ7	412 aa	Predicted RBP	22.73	■■□□□ 1.23
CNOT7-204	ENST00000518885	CHSY3	Q70JA7	882 aa		22.73	■■□□□ 1.23
CNOT7-204	ENST00000518885	CA13	Q8N1Q1	262 aa		22.73	■■□□□ 1.23
CNOT7-204	ENST00000518885	SLC5A8	Q8N695	610 aa		22.73	■■□□□ 1.23
CNOT7-204	ENST00000518885	TEX9	Q8N6V9	391 aa		22.73	■■□□□ 1.23
CNOT7-204	ENST00000518885	C7orf57	Q8NEG2	295 aa		22.73	■■□□□ 1.23
CNOT7-204	ENST00000518885	ISL2	Q96A47	359 aa		22.73	■■□□□ 1.23
CNOT7-204	ENST00000518885	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	22.73	■■□□□ 1.23
CNOT7-204	ENST00000518885	STMN3	Q9NZ72	180 aa		22.73	■■□□□ 1.23
CNOT7-204	ENST00000518885	ZNF490	Q9ULM2	529 aa	Predicted RBP	22.73	■■□□□ 1.23
CNOT7-204	ENST00000518885	NFU1	Q9UMS0	254 aa		22.73	■■□□□ 1.23
CNOT7-204	ENST00000518885	FLNC	Q14315	2725 aa		22.73	■■□□□ 1.23
CNOT7-204	ENST00000518885		A8MUI8	341 aa		22.72	■■□□□ 1.23
CNOT7-204	ENST00000518885	CDK2AP1	O14519	115 aa		22.72	■■□□□ 1.23
CNOT7-204	ENST00000518885	B3GALT4	O96024	378 aa		22.72	■■□□□ 1.23
CNOT7-204	ENST00000518885	GNLY	P22749	145 aa		22.72	■■□□□ 1.23
CNOT7-204	ENST00000518885	PLA2G16	P53816	162 aa		22.72	■■□□□ 1.23
CNOT7-204	ENST00000518885	FHL5	Q5TD97	284 aa		22.72	■■□□□ 1.23
CNOT7-204	ENST00000518885	OR1N1	Q8NGS0	311 aa		22.72	■■□□□ 1.23
CNOT7-204	ENST00000518885	TSLP	Q969D9	159 aa		22.72	■■□□□ 1.23
CNOT7-204	ENST00000518885	MAGEB10	Q96LZ2	347 aa	Predicted RBP	22.72	■■□□□ 1.23
CNOT7-204	ENST00000518885	TBCD	Q9BTW9	1192 aa		22.72	■■□□□ 1.23
CNOT7-204	ENST00000518885	ASF1B	Q9NVP2	202 aa		22.72	■■□□□ 1.23
CNOT7-204	ENST00000518885	CPSF2	Q9P2I0	782 aa	Known RBP	22.72	■■□□□ 1.23
CNOT7-204	ENST00000518885	OR2W5	A6NFC9	320 aa		22.71	■■□□□ 1.23
CNOT7-204	ENST00000518885	UGDH	O60701	494 aa		22.71	■■□□□ 1.23
CNOT7-204	ENST00000518885	SMIM24	O75264	130 aa		22.71	■■□□□ 1.23
CNOT7-204	ENST00000518885	PCNA	P12004	261 aa		22.71	■■□□□ 1.23
CNOT7-204	ENST00000518885	MTHFD2	P13995	350 aa		22.71	■■□□□ 1.23
CNOT7-204	ENST00000518885	GMPR	P36959	345 aa		22.71	■■□□□ 1.23
CNOT7-204	ENST00000518885	TNFSF10	P50591	281 aa		22.71	■■□□□ 1.23
CNOT7-204	ENST00000518885	HSD17B7	P56937	341 aa		22.71	■■□□□ 1.23
CNOT7-204	ENST00000518885	RAB38	P57729	211 aa		22.71	■■□□□ 1.23
CNOT7-204	ENST00000518885	MEP1A	Q16819	746 aa		22.71	■■□□□ 1.23
CNOT7-204	ENST00000518885	LIPJ	Q5W064	366 aa		22.71	■■□□□ 1.23
CNOT7-204	ENST00000518885	GRHL2	Q6ISB3	625 aa		22.71	■■□□□ 1.23
CNOT7-204	ENST00000518885	ABHD17C	Q6PCB6	329 aa		22.71	■■□□□ 1.23
CNOT7-204	ENST00000518885	FAM180A	Q6UWF9	173 aa		22.71	■■□□□ 1.23
CNOT7-204	ENST00000518885	MYLK4	Q86YV6	388 aa	Predicted RBP	22.71	■■□□□ 1.23
CNOT7-204	ENST00000518885	ZNF595	Q8IYB9	648 aa		22.71	■■□□□ 1.23
CNOT7-204	ENST00000518885	LAS2	Q8IYD9	372 aa		22.71	■■□□□ 1.23
CNOT7-204	ENST00000518885	CYP4X1	Q8N118	509 aa		22.71	■■□□□ 1.23
CNOT7-204	ENST00000518885	MTBP	Q96DY7	904 aa		22.71	■■□□□ 1.23
CNOT7-204	ENST00000518885	CMTM7	Q96FZ5	175 aa		22.71	■■□□□ 1.23
CNOT7-204	ENST00000518885	SCYL1	Q96KG9	808 aa		22.71	■■□□□ 1.23
CNOT7-204	ENST00000518885	ACTR8	Q9H981	624 aa		22.71	■■□□□ 1.23
CNOT7-204	ENST00000518885	PCDHGA11	Q9Y5H2	935 aa		22.71	■■□□□ 1.23
CNOT7-204	ENST00000518885	CSAG2	Q9Y5P2	127 aa		22.71	■■□□□ 1.23
CNOT7-204	ENST00000518885	SCN3A	Q9NY46	2000 aa		22.7	■■□□□ 1.23
CNOT7-204	ENST00000518885	TCRBV16S1A1N1	A0A5B0	115 aa		22.7	■■□□□ 1.22
CNOT7-204	ENST00000518885	BLACE	A4D250	179 aa		22.7	■■□□□ 1.22
CNOT7-204	ENST00000518885	OR5H15	A6NDH6	313 aa		22.7	■■□□□ 1.22
CNOT7-204	ENST00000518885	TCP11X1	B4DZS4	312 aa		22.7	■■□□□ 1.22
CNOT7-204	ENST00000518885	KLK8	O60259	260 aa		22.7	■■□□□ 1.22
CNOT7-204	ENST00000518885	CELA2A	P08217	269 aa		22.7	■■□□□ 1.22

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms