RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 CCL4L1Q8NHW4 92 aa25.32■■□□□ 1.64
COL13A1-210ENST00000517713 JPH3Q8WXH2 748 aaPredicted RBP25.32■■□□□ 1.64
COL13A1-210ENST00000517713 MAL2Q969L2 176 aa25.32■■□□□ 1.64
COL13A1-210ENST00000517713 MSANTD3Q96H12 275 aa25.32■■□□□ 1.64
COL13A1-210ENST00000517713 FBXL20Q96IG2 436 aa25.32■■□□□ 1.64
COL13A1-210ENST00000517713 CAAP1Q9H8G2 361 aa25.32■■□□□ 1.64
COL13A1-210ENST00000517713 RAPGEFL1Q9UHV5 662 aa25.32■■□□□ 1.64
COL13A1-210ENST00000517713 H3BNH8 94 aa25.31■■□□□ 1.64
COL13A1-210ENST00000517713 MAP3K13O43283 966 aa25.31■■□□□ 1.64
COL13A1-210ENST00000517713 MBTPS2O43462 519 aa25.31■■□□□ 1.64
COL13A1-210ENST00000517713 TBX19O60806 448 aa25.31■■□□□ 1.64
COL13A1-210ENST00000517713 SEMA4FO95754 770 aa25.31■■□□□ 1.64
COL13A1-210ENST00000517713 BCL6P41182 706 aa25.31■■□□□ 1.64
COL13A1-210ENST00000517713 YPEL5P62699 121 aa25.31■■□□□ 1.64
COL13A1-210ENST00000517713 LRRC32Q14392 662 aa25.31■■□□□ 1.64
COL13A1-210ENST00000517713 TMEM145Q8NBT3 493 aa25.31■■□□□ 1.64
COL13A1-210ENST00000517713 OR5K1Q8NHB7 308 aa25.31■■□□□ 1.64
COL13A1-210ENST00000517713 RMND5BQ96G75 393 aaPredicted RBP25.31■■□□□ 1.64
COL13A1-210ENST00000517713 TMEM168Q9H0V1 697 aa25.31■■□□□ 1.64
COL13A1-210ENST00000517713 IL1RAPQ9NPH3 570 aa25.31■■□□□ 1.64
COL13A1-210ENST00000517713 PCOLCE2Q9UKZ9 415 aa25.31■■□□□ 1.64
COL13A1-210ENST00000517713 PNMA8BQ9ULN7 279 aaPredicted RBP25.31■■□□□ 1.64
COL13A1-210ENST00000517713 NDRG2Q9UN36 371 aaKnown RBP25.31■■□□□ 1.64
COL13A1-210ENST00000517713 LRIT2A6NDA9 550 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 RASGRP1O95267 797 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 ALBP02768 609 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 ETFAP13804 333 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 SHMT2P34897 504 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 CHI3L1P36222 383 aaPredicted RBP25.3■■□□□ 1.64
COL13A1-210ENST00000517713 ACTR1BP42025 376 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 GSTM5P46439 218 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 ALDH9A1P49189 494 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 SRP54P61011 504 aaKnown RBP25.3■■□□□ 1.64
COL13A1-210ENST00000517713 ACTR1AP61163 376 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 ADARB1P78563 741 aaKnown RBP25.3■■□□□ 1.64
COL13A1-210ENST00000517713 APOFQ13790 326 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 TEAD4Q15561 434 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 OR4C11Q6IEV9 310 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 AMIGO1Q86WK6 493 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 FBXL6Q8N531 539 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 LCN9Q8WX39 176 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 DPH7Q9BTV6 452 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 TRIM4Q9C037 500 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 DDX31Q9H8H2 851 aaKnown RBP25.3■■□□□ 1.64
COL13A1-210ENST00000517713 USP36Q9P275 1121 aaKnown RBP25.3■■□□□ 1.64
COL13A1-210ENST00000517713 ACSL6Q9UKU0 697 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 BRWD1Q9NSI6 2320 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 H0YAE9 185 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 HAT1O14929 419 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 TMPRSS11DO60235 418 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 SEMG1P04279 462 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 TFAP2AP05549 437 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 ATP6V1B1P15313 513 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 CMPK1P30085 196 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 RPL5P46777 297 aaKnown RBP25.3■■□□□ 1.64
COL13A1-210ENST00000517713 CASP9P55211 416 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 SLC30A9Q6PML9 568 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 NATD1Q8N6N6 113 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 OR4E2Q8NGC2 313 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 OR5AK3PQ8NH89 298 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 OSBPL10Q9BXB5 764 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 OR6C2Q9NZP2 312 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 ZNF624Q9P2J8 865 aaPredicted RBP25.3■■□□□ 1.64
COL13A1-210ENST00000517713 HS3ST3A1Q9Y663 406 aa25.3■■□□□ 1.64
COL13A1-210ENST00000517713 HEATR5BQ9P2D3 2071 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 A0A1B0GTW7 788 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 E2F6O75461 281 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 TNFRSF21O75509 655 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 CLIC3O95833 236 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 THRBP10828 461 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 SOAT1P35610 550 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 DCTP40126 519 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 PLA2G16P53816 162 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 FADDQ13158 208 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 SMAD4Q13485 552 aaKnown RBP25.29■■□□□ 1.64
COL13A1-210ENST00000517713 ZIC1Q15915 447 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 TMEM35AQ53FP2 167 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 SPESP1Q6UW49 350 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 VTCN1Q7Z7D3 282 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 TMEM179BQ7Z7N9 219 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 HS3ST5Q8IZT8 346 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 TSPAN14Q8NG11 270 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 HSH2DQ96JZ2 352 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 ASPSCR1Q9BZE9 553 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 SOX17Q9H6I2 414 aaPredicted RBP25.29■■□□□ 1.64
COL13A1-210ENST00000517713 SMURF2Q9HAU4 748 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 AP1M2Q9Y6Q5 423 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 PLXND1Q9Y4D7 1925 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 ISM1B1AKI9 464 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 FKBP9O95302 570 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 CHRM5P08912 532 aaPredicted RBP25.29■■□□□ 1.64
COL13A1-210ENST00000517713 DDX5P17844 614 aaKnown RBP25.29■■□□□ 1.64
COL13A1-210ENST00000517713 SLC5A12Q1EHB4 618 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 ZIK1Q3SY52 487 aaPredicted RBP25.29■■□□□ 1.64
COL13A1-210ENST00000517713 GCNT6Q5T4J0 391 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 FAM180BQ6P0A1 224 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 TRIM40Q6P9F5 258 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 CHRDL2Q6WN34 429 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 TBC1D19Q8N5T2 526 aa25.29■■□□□ 1.64
COL13A1-210ENST00000517713 RBM4BQ9BQ04 359 aaKnown RBP25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms