RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 MAT1AQ00266 395 aaKnown RBP9.36□□□□□ -0.91
CLN8-202ENST00000517514 TGIF1Q15583 401 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 FAM214AQ32MH5 1076 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 SLC9B1Q4ZJI4 515 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 TMEM35AQ53FP2 167 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 OR4C11Q6IEV9 310 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 FAM198BQ6UWH4 519 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 CHSY3Q70JA7 882 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 LARP4Q71RC2 724 aaKnown RBP eCLIP9.36□□□□□ -0.91
CLN8-202ENST00000517514 COMMD6Q7Z4G1 85 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 C1orf52Q8N6N3 182 aaKnown RBP9.36□□□□□ -0.91
CLN8-202ENST00000517514 GBP7Q8N8V2 638 aaPredicted RBP9.36□□□□□ -0.91
CLN8-202ENST00000517514 TMEM52Q8NDY8 209 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 RFWD2Q8NHY2 731 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 PIWIL2Q8TC59 973 aaKnown RBP9.36□□□□□ -0.91
CLN8-202ENST00000517514 UCN3Q969E3 161 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 C19orf60Q96EN9 201 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 MAELQ96JY0 434 aaKnown RBP9.36□□□□□ -0.91
CLN8-202ENST00000517514 PPP1R36Q96LQ0 422 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 TBCDQ9BTW9 1192 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 NDC1Q9BTX1 674 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 NUF2Q9BZD4 464 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 CHST8Q9H2A9 424 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 DDX31Q9H8H2 851 aaKnown RBP9.36□□□□□ -0.91
CLN8-202ENST00000517514 MEAF6Q9HAF1 191 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 IRAK4Q9NWZ3 460 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 SIRT5Q9NXA8 310 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 VPS29Q9UBQ0 182 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 DLGAP4Q9Y2H0 992 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 ASB4Q9Y574 426 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 USH1CQ9Y6N9 552 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 AHCTF1Q8WYP5 2266 aa9.36□□□□□ -0.91
CLN8-202ENST00000517514 ZZEF1O43149 2961 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 H0YIG0 161 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 SLC28A1O00337 649 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 CHST10O43529 356 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 RAD1O60671 282 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 CRCPO75575 148 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 RSL1D1O76021 490 aaKnown RBP9.35□□□□□ -0.91
CLN8-202ENST00000517514 HIST1H1TP22492 207 aaPredicted RBP9.35□□□□□ -0.91
CLN8-202ENST00000517514 ALAS2P22557 587 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 F8A1P23610 371 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 RBMS1P29558 406 aaKnown RBP9.35□□□□□ -0.91
CLN8-202ENST00000517514 LSP1P33241 339 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 HNRNPFP52597 415 aaKnown RBP9.35□□□□□ -0.91
CLN8-202ENST00000517514 ARFIP1P53367 373 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 SEC24CP53992 1094 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 HNRNPH2P55795 449 aaKnown RBP9.35□□□□□ -0.91
CLN8-202ENST00000517514 SRSF6Q13247 344 aaKnown RBP9.35□□□□□ -0.91
CLN8-202ENST00000517514 MAP7Q14244 749 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 SLC9A5Q14940 896 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 HERC3Q15034 1050 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 NDUFA9Q16795 377 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 TBC1D25Q3MII6 688 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 NKAIN1Q4KMZ8 207 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 RFTN2Q52LD8 501 aaPredicted RBP9.35□□□□□ -0.91
CLN8-202ENST00000517514 C6orf136Q5SQH8 315 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 FAM69BQ5VUD6 431 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 MRPL14Q6P1L8 145 aaKnown RBP9.35□□□□□ -0.91
CLN8-202ENST00000517514 GALNT18Q6P9A2 607 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 CYB5D1Q6P9G0 228 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 EPGNQ6UW88 154 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 C6orf15Q6UXA7 325 aaPredicted RBP9.35□□□□□ -0.91
CLN8-202ENST00000517514 ABHD13Q7L211 337 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 CRLF3Q8IUI8 442 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 DDIASQ8IXT1 998 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 CA13Q8N1Q1 262 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 ZCCHC7Q8N3Z6 543 aaKnown RBP9.35□□□□□ -0.91
CLN8-202ENST00000517514 ACOT4Q8N9L9 421 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.35□□□□□ -0.91
CLN8-202ENST00000517514 PROKR1Q8TCW9 393 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 NKD1Q969G9 470 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 RGMAQ96B86 450 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 NXPE2Q96DL1 559 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 CLIP3Q96DZ5 547 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 MVB12AQ96EY5 273 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 MMABQ96EY8 250 aaPredicted RBP9.35□□□□□ -0.91
CLN8-202ENST00000517514 THOC1Q96FV9 657 aaKnown RBP9.35□□□□□ -0.91
CLN8-202ENST00000517514 SLC45A3Q96JT2 553 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 FAR2Q96K12 515 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 KCNC2Q96PR1 638 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 OR52B2Q96RD2 323 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 MAPKAP1Q9BPZ7 522 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 EBF4Q9BQW3 602 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 NLNQ9BYT8 704 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 WDR55Q9H6Y2 383 aaPredicted RBP9.35□□□□□ -0.91
CLN8-202ENST00000517514 AKTIPQ9H8T0 292 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 LRTM1Q9HBL6 345 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 ZNF304Q9HCX3 659 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 FGFR1OP2Q9NVK5 253 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 HCN3Q9P1Z3 774 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 CTSFQ9UBX1 484 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 NDOR1Q9UHB4 597 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 EXO1Q9UQ84 846 aaKnown RBP9.35□□□□□ -0.91
CLN8-202ENST00000517514 CLDN16Q9Y5I7 305 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 AK5Q9Y6K8 562 aa9.35□□□□□ -0.91
CLN8-202ENST00000517514 IGLV3-12A0A075B6K2 115 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 LOC101059948A0A1B0GTJ6 334 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 OR2W5A6NFC9 320 aa9.34□□□□□ -0.91
CLN8-202ENST00000517514 URADA6NGE7 173 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms