RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 MACROD1Q9BQ69 325 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 DPH2Q9BQC3 489 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 FAM117AQ9C073 453 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 ACTR5Q9H9F9 607 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 LRTM1Q9HBL6 345 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 APMAPQ9HDC9 416 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 STARD5Q9NSY2 213 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 MCM8Q9UJA3 840 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 CDC14AQ9UNH5 594 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 SATB2Q9UPW6 733 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 TMEM184BQ9Y519 407 aaPredicted RBP11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 PTGDR2Q9Y5Y4 395 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 SDK2Q58EX2 2172 aa11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 FASNP49327 2511 aaKnown RBP11.37□□□□□ -0.59
PDLIM5-220ENST00000514830 A0A0A6YYD5 115 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 CPNE3O75131 537 aaKnown RBP11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 FAM107AO95990 144 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 ITIH1P19827 911 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 ATP5A1P25705 553 aaKnown RBP11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 CD82P27701 267 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 MAPK1P28482 360 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 RORAP35398 523 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 MRPL19P49406 292 aaKnown RBP11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 RAP1GDS1P52306 607 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 AQP5P55064 265 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 MTTPP55157 894 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 ERVK-8P63133 956 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 EMX2Q04743 252 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 ACSM2AQ08AH3 577 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 NR6A1Q15406 480 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 AP5B1Q2VPB7 878 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 SLC9B1Q4ZJI4 515 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 C3orf38Q5JPI3 329 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 METTL21CQ5VZV1 264 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 ACSM2BQ68CK6 577 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 MRM1Q6IN84 353 aaKnown RBP11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 ZNF517Q6ZMY9 492 aaPredicted RBP11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 COMMD6Q7Z4G1 85 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 SPATA19Q7Z5L4 167 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 NUDT13Q86X67 352 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 TMEM126BQ8IUX1 230 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 TUBGCP3Q96CW5 907 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 SLC46A1Q96NT5 459 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 GBP5Q96PP8 586 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 C17orf62Q9BQA9 187 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 MRPL1Q9BYD6 325 aaKnown RBP11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 AKTIPQ9H8T0 292 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 ANKHQ9HCJ1 492 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 LYRM4Q9HD34 91 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 NPHS2Q9NP85 383 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 PRDM9Q9NQV7 894 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 PISDQ9UG56 409 aa11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 MRPS2Q9Y399 296 aaKnown RBP11.36□□□□□ -0.59
PDLIM5-220ENST00000514830 ATP6AP2A0A1C7CYW4 349 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 CDRT15L2A8MXV6 281 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 C9orf172C9J069 976 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 SNX3O60493 162 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 SEC22BO75396 215 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 ATP6AP2O75787 350 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 KLHL18O94889 574 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 MED26O95402 600 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 TIAF1O95411 115 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 PRPS2P11908 318 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 LBPP18428 481 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 IL10P22301 178 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 TPP2P29144 1249 aaPredicted RBP11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 EPHA3P29320 983 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 TIA1P31483 386 aaKnown RBP eCLIP11.35□□□□□ -0.594e-7■■■■■ 27.1
PDLIM5-220ENST00000514830 AVPR1BP47901 424 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 PLA2G16P53816 162 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 SNRPNP63162 240 aaKnown RBP11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 RAE1P78406 368 aaKnown RBP11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 DSG2Q14126 1118 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 RFTN2Q52LD8 501 aaPredicted RBP11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 SPDYAQ5MJ70 313 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 VWA5B1Q5TIE3 1220 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 NOXRED1Q6NXP6 359 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 ZNF793Q6ZN11 406 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 TTLL10Q6ZVT0 673 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 ACAD11Q709F0 780 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 SPATA21Q7Z572 469 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 PIGWQ7Z7B1 504 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 CPLX4Q7Z7G2 160 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 PDSS2Q86YH6 399 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 FAM9CQ8IZT9 166 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 C1orf52Q8N6N3 182 aaKnown RBP11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 ACOT4Q8N9L9 421 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 RFWD2Q8NHY2 731 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 ADAMTS18Q8TE60 1221 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 ZCCHC14Q8WYQ9 949 aaKnown RBP11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 APIPQ96GX9 242 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 WDR55Q9H6Y2 383 aaPredicted RBP11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 TCF7L2Q9NQB0 619 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 MRGBPQ9NV56 204 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 IRAK4Q9NWZ3 460 aa11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 LYARQ9NX58 379 aaKnown RBP11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 NOP53Q9NZM5 478 aaKnown RBP11.35□□□□□ -0.59
PDLIM5-220ENST00000514830 NAALAD2Q9Y3Q0 740 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms