RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 PSMD12O00232 456 aaPredicted RBP9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 CDK2AP1O14519 115 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 CLGNO14967 610 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 LRRTM2O43300 516 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 ERI3O43414 337 aaKnown RBP9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 CRYABP02511 175 aaKnown RBP9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 S100BP04271 92 aaPredicted RBP9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 MYBL2P10244 700 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 EPORP19235 508 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 TFEBP19484 476 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 CD22P20273 847 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 GMPRP36959 345 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 TAS2R50P59544 299 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 BTN3A2P78410 334 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 CKAP4Q07065 602 aaKnown RBP9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 DLG1Q12959 904 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 DOC2AQ14183 400 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 TERF2Q15554 542 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 OR1C1Q15619 314 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 PDK4Q16654 411 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 ADNP2Q6IQ32 1131 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 LRRC70Q7Z2Q7 622 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 MAMDC2Q7Z304 686 aaPredicted RBP9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 SCUBE1Q8IWY4 988 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 KIF2BQ8N4N8 673 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 SNX31Q8N9S9 440 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 NFAM1Q8NET5 270 aaPredicted RBP9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 ADAMTS18Q8TE60 1221 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 UBTD2Q8WUN7 234 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 ESAMQ96AP7 390 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 SCMH1Q96GD3 660 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 FAR2Q96K12 515 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 QRFPRQ96P65 431 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 ATOH8Q96SQ7 321 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 UTP23Q9BRU9 249 aaKnown RBP9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 EFCAB11Q9BUY7 163 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 NPLQ9BXD5 320 aaPredicted RBP9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 RHBGQ9H310 441 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 ALG9Q9H6U8 611 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 IGSF5Q9NSI5 407 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 ZDHHC18Q9NUE0 388 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 CD274Q9NZQ7 290 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 MMACHCQ9Y4U1 282 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 ASB1Q9Y576 335 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 CLDN16Q9Y5I7 305 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 A0A088AWK7 358 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 A0A0G2JN53 185 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 ANKDD1BA6NHY2 528 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 TGFBR3LH3BV60 316 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 CCNT2O60583 730 aaKnown RBP9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 KERAO60938 352 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 NEURL1O76050 574 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 LTA4HP09960 611 aaKnown RBP9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 ZNF10P21506 573 aaPredicted RBP9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 MST1P26927 711 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 CRABP2P29373 138 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 HPDP32754 393 aaPredicted RBP9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 CD96P40200 585 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 CASP2P42575 452 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 KCNC1P48547 511 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 PER3P56645 1201 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 RAB38P57729 211 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 KCNK10P57789 538 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 PMP22Q01453 160 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 RUNX2Q13950 521 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 TBCCQ15814 346 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 XKR6Q5GH73 641 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 C8orf74Q6P047 294 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 TRIM40Q6P9F5 258 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 ABHD17CQ6PCB6 329 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 RAPH1Q70E73 1250 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 TBC1D1Q86TI0 1168 aaPredicted RBP9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 ISCA2Q86U28 154 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 ARMC10Q8N2F6 343 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 TMEM52Q8NDY8 209 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 ARMC2Q8NEN0 867 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 OR2L5Q8NG80 312 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 STAG3L4Q8TBR4 150 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 CCT6BQ92526 530 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 EXT2Q93063 718 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 HES7Q9BYE0 225 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 CD244Q9BZW8 370 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 REXO4Q9GZR2 422 aaKnown RBP9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 NMRAL1Q9HBL8 299 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 ANKRD10Q9NXR5 420 aa9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 ZNF490Q9ULM2 529 aaPredicted RBP9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 PPIEQ9UNP9 301 aaKnown RBP9.79□□□□□ -0.84
HMGXB3-205ENST00000514469 A0A1B0GUH1 482 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 HMX2A2RU54 273 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 ASPDHA6ND91 283 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 SUPT3HB4E1H0 165 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 UBXN8O00124 270 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 B3GALT2O43825 422 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 SUPT3HO75486 399 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 UNC5CO95185 931 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 CERS1P27544 350 aa9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 TPP2P29144 1249 aaPredicted RBP9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 ST13P50502 369 aaKnown RBP9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 HNRNPFP52597 415 aaKnown RBP9.78□□□□□ -0.84
HMGXB3-205ENST00000514469 PLA2G16P53816 162 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms