RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.92□□□□□ -1.14
CCL28-204ENST00000514421 TMEM45AQ9NWC5 275 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 WWOXQ9NZC7 414 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 GPRC5BQ9NZH0 403 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 DHCR7Q9UBM7 475 aaKnown RBP7.92□□□□□ -1.14
CCL28-204ENST00000514421 NDOR1Q9UHB4 597 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 GPN3Q9UHW5 284 aaPredicted RBP7.92□□□□□ -1.14
CCL28-204ENST00000514421 CDC14AQ9UNH5 594 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 LHX6Q9UPM6 363 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 SH2B3Q9UQQ2 575 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 STK38LQ9Y2H1 464 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 PCDHGA4Q9Y5G9 962 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 TNPO3Q9Y5L0 923 aaKnown RBP7.92□□□□□ -1.14
CCL28-204ENST00000514421 DNAJC15Q9Y5T4 150 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 CACNA1GO43497 2377 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 LAMA5O15230 3695 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 ZFYVE26Q68DK2 2539 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 A0A1B0GX78 115 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 TRBC2A0A5B9 178 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 FEZF1A0PJY2 475 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 SUPT3HB4E1H0 165 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 C9J4A7 227 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 E9PBE3 544 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 CLGNO14967 610 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 OR1F1O43749 312 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 KLHL41O60662 606 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 VPS4BO75351 444 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 SUPT3HO75486 399 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 CREG1O75629 220 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 SUPT7LO94864 414 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 WDR47O94967 919 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 SIX3O95343 332 aaPredicted RBP7.91□□□□□ -1.14
CCL28-204ENST00000514421 ESRRBO95718 433 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 ALBP02768 609 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 CAPN1P07384 714 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 C1GALT1C1LP0DN25 315 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 COX4I1P13073 169 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 GFAPP14136 432 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 NCF2P19878 526 aaPredicted RBP7.91□□□□□ -1.14
CCL28-204ENST00000514421 PIK3R1P27986 724 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 EEF1DP29692 281 aaKnown RBP7.91□□□□□ -1.14
CCL28-204ENST00000514421 HSPA7P48741 367 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 RHDQ02161 417 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 CLCQ05315 142 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 FAM53BQ14153 422 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 NDUFA9Q16795 377 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 HKDC1Q2TB90 917 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 NKAIN1Q4KMZ8 207 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 XKR7Q5GH72 579 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 ATG9BQ674R7 924 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 OGFOD2Q6N063 350 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 PRMT9Q6P2P2 845 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 SLCO4C1Q6ZQN7 724 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 OVCH1Q7RTY7 1134 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 FBXO27Q8NI29 283 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 ESAMQ96AP7 390 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 CRELD1Q96HD1 420 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 TMEM79Q9BSE2 394 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 DENND2DQ9H6A0 471 aaPredicted RBP7.91□□□□□ -1.14
CCL28-204ENST00000514421 ACSS2Q9NR19 701 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 IFT80Q9P2H3 777 aaPredicted RBP7.91□□□□□ -1.14
CCL28-204ENST00000514421 ZNF225Q9UK10 706 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 COPG1Q9Y678 874 aaKnown RBP7.91□□□□□ -1.14
CCL28-204ENST00000514421 HEATR5BQ9P2D3 2071 aa7.91□□□□□ -1.14
CCL28-204ENST00000514421 SNRNP200O75643 2136 aaKnown RBP7.91□□□□□ -1.14
CCL28-204ENST00000514421 A0A088AWK7 358 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 LRRC14BA6NHZ5 514 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 K7EPI3 171 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 AZIN1O14977 448 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 CCNT2O60583 730 aaKnown RBP7.9□□□□□ -1.14
CCL28-204ENST00000514421 PEX11AO75192 247 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 UROSP10746 265 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 VARSP26640 1264 aaKnown RBP7.9□□□□□ -1.14
CCL28-204ENST00000514421 GCKP35557 465 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 AHRP35869 848 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 PGM1P36871 562 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 BCL6P41182 706 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 CASP2P42575 452 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 OR1D4P47884 311 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 CCNG1P51959 295 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 CYP4F2P78329 520 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 PCDH1Q08174 1060 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 PWP1Q13610 501 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 ERV3-1Q14264 604 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 SQLEQ14534 574 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 SSPNQ14714 243 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 RBBP5Q15291 538 aaKnown RBP7.9□□□□□ -1.14
CCL28-204ENST00000514421 PDCD2Q16342 344 aaPredicted RBP7.9□□□□□ -1.14
CCL28-204ENST00000514421 HIST2H2ACQ16777 129 aaPredicted RBP7.9□□□□□ -1.14
CCL28-204ENST00000514421 TRMT5Q32P41 509 aaKnown RBP7.9□□□□□ -1.14
CCL28-204ENST00000514421 FBXO48Q5FWF7 155 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 HIST2H2AA3Q6FI13 130 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 MRPL14Q6P1L8 145 aaKnown RBP7.9□□□□□ -1.14
CCL28-204ENST00000514421 RPS27LQ71UM5 84 aaKnown RBP7.9□□□□□ -1.14
CCL28-204ENST00000514421 LRRC70Q7Z2Q7 622 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 VN1R4Q7Z5H5 301 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 NET1Q7Z628 596 aaPredicted RBP7.9□□□□□ -1.14
CCL28-204ENST00000514421 SYVN1Q86TM6 617 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 ASPGQ86U10 573 aa7.9□□□□□ -1.14
CCL28-204ENST00000514421 KRT78Q8N1N4 520 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms