RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, human

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-223	ENST00000514402	REN	P00797	406 aa		3.16	□□□□□ -1.9
MATR3-223	ENST00000514402	IGHG1	P01857	330 aa		3.16	□□□□□ -1.9
MATR3-223	ENST00000514402	DNTT	P04053	509 aa		3.16	□□□□□ -1.9
MATR3-223	ENST00000514402	TSPY3	P0CV98	308 aa		3.16	□□□□□ -1.9
MATR3-223	ENST00000514402	TSPY8	P0CW00	308 aa		3.16	□□□□□ -1.9
MATR3-223	ENST00000514402	RPL9	P32969	192 aa	Known RBP	3.16	□□□□□ -1.9
MATR3-223	ENST00000514402	PPIA	P62937	165 aa	Known RBP	3.16	□□□□□ -1.9
MATR3-223	ENST00000514402	TSPY1	Q01534	308 aa		3.16	□□□□□ -1.9
MATR3-223	ENST00000514402	ROR1	Q01973	937 aa		3.16	□□□□□ -1.9
MATR3-223	ENST00000514402	POM121L1P	Q3SYA9	428 aa		3.16	□□□□□ -1.9
MATR3-223	ENST00000514402	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	3.16	□□□□□ -1.9
MATR3-223	ENST00000514402	RPAIN	Q86UA6	219 aa		3.16	□□□□□ -1.9
MATR3-223	ENST00000514402	LRRC49	Q8IUZ0	686 aa		3.16	□□□□□ -1.9
MATR3-223	ENST00000514402	RHOXF1	Q8NHV9	184 aa		3.16	□□□□□ -1.9
MATR3-223	ENST00000514402	VPS33A	Q96AX1	596 aa		3.16	□□□□□ -1.9
MATR3-223	ENST00000514402	ZMAT2	Q96NC0	199 aa	Known RBP	3.16	□□□□□ -1.9
MATR3-223	ENST00000514402	TSSK2	Q96PF2	358 aa		3.16	□□□□□ -1.9
MATR3-223	ENST00000514402	PINK1	Q9BXM7	581 aa		3.16	□□□□□ -1.9
MATR3-223	ENST00000514402	TRIM7	Q9C029	511 aa		3.16	□□□□□ -1.9
MATR3-223	ENST00000514402	DBF4	Q9UBU7	674 aa	Predicted RBP	3.16	□□□□□ -1.9
MATR3-223	ENST00000514402	RUVBL2	Q9Y230	463 aa	Known RBP	3.16	□□□□□ -1.9
MATR3-223	ENST00000514402	KLK4	Q9Y5K2	254 aa		3.16	□□□□□ -1.9
MATR3-223	ENST00000514402	BICDL2	A1A5D9	508 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402		E5RGE8	158 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	LMO7DN	F2Z398	122 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	PGRMC2	O15173	223 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	ZNF749	O43361	778 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	DIAPH2	O60879	1101 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	MT-ND1	P03886	318 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	PTAFR	P25105	342 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	OAS2	P29728	719 aa	Known RBP	3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	GSK3B	P49841	420 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	RNF212	Q495C1	297 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	TXNRD3NB	Q6F5E7	133 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	KLHL10	Q6JEL2	608 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	REG3G	Q6UW15	175 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	BTNL8	Q6UX41	500 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	ZSCAN30	Q86W11	494 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	FAM219A	Q8IW50	185 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	ZBED8	Q8IZ13	594 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	ABCA7	Q8IZY2	2146 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	CCAR2	Q8N163	923 aa	Known RBP	3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	TMEM99	Q8N816	258 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	RTL3	Q8N8U3	475 aa	Known RBP	3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	KIF18A	Q8NI77	898 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	NABP1	Q96AH0	204 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	ANKRD2	Q9GZV1	360 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	SP140L	Q9H930	580 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	KCNK13	Q9HB14	408 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	PFDN4	Q9NQP4	134 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	TNFRSF19	Q9NS68	423 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	THYN1	Q9P016	225 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	GIMAP2	Q9UG22	337 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	SPATA2	Q9UM82	520 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	NSG2	Q9Y328	171 aa		3.15	□□□□□ -1.91
MATR3-223	ENST00000514402	C2orf92	A0A1B0GVN3	265 aa		3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	FAM170A	A1A519	330 aa		3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	PRSS46	E5RG02	174 aa		3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	FCGR3B	O75015	233 aa		3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	FGF19	O95750	216 aa		3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	ANGPTL1	O95841	491 aa		3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	FDPS	P14324	419 aa	Known RBP	3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	ANPEP	P15144	967 aa		3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	CALR	P27797	417 aa	Known RBP	3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	SSTR1	P30872	391 aa		3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	CAMK2D	Q13557	499 aa		3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	CDC37	Q16543	378 aa	Predicted RBP	3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	KNOP1	Q1ED39	458 aa	Known RBP	3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	TWISTNB	Q3B726	338 aa	Predicted RBP	3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	KRTAP13-3	Q3SY46	172 aa		3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	PRR30	Q53SZ7	412 aa	Predicted RBP	3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	ZNF542P	Q5EBM4	170 aa		3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	MUC21	Q5SSG8	566 aa		3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	TEX35	Q5T0J7	233 aa		3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	LINC00242	Q5T6M2	205 aa		3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	EMB	Q6PCB8	327 aa		3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	SERINC5	Q86VE9	423 aa		3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	SNX32	Q86XE0	403 aa		3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	HSCB	Q8IWL3	235 aa		3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	APCDD1	Q8J025	514 aa		3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	ATP6V1E2	Q96A05	226 aa		3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	CNOT6L	Q96LI5	555 aa	Known RBP	3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	ALKBH3	Q96Q83	286 aa	Predicted RBP	3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	RAB3IP	Q96QF0	476 aa	Predicted RBP	3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	INPP5K	Q9BT40	448 aa		3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	OR10A4	Q9H209	315 aa		3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	ST6GALNAC4	Q9H4F1	302 aa		3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	C3orf14	Q9HBI5	128 aa		3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	DEPP	Q9NTK1	212 aa		3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	KIF25-AS1	Q9Y6Z4	181 aa		3.14	□□□□□ -1.91
MATR3-223	ENST00000514402	ZNF318	Q5VUA4	2279 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402		A0A0B4J203	849 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402		A0A1B0GTH9	108 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402		E9PAM4	449 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	PPIP5K2	O43314	1243 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	FAM200B	P0CF97	657 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	CD1D	P15813	335 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	ADRA2C	P18825	462 aa		3.13	□□□□□ -1.91
MATR3-223	ENST00000514402	SLC1A4	P43007	532 aa		3.13	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms