RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 ANXA6P08133 673 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 GSTM1P09488 218 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 HSD17B2P37059 387 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 CRYBB2P43320 205 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 RECQLP46063 649 aaPredicted RBP7.11□□□□□ -1.27
CLIP1-205ENST00000514271 SLC12A2P55011 1212 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 SNRPD1P62314 119 aaKnown RBP7.11□□□□□ -1.27
CLIP1-205ENST00000514271 ELOAQ14241 798 aaKnown RBP7.11□□□□□ -1.27
CLIP1-205ENST00000514271 HNRNPA1L2Q32P51 320 aaKnown RBP7.11□□□□□ -1.27
CLIP1-205ENST00000514271 CYP20A1Q6UW02 462 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 IDO2Q6ZQW0 420 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 CLIP4Q8N3C7 705 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 RASSF5Q8WWW0 418 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 ASB12Q8WXK4 309 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 OR8D1Q8WZ84 308 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 TRMT61AQ96FX7 289 aaKnown RBP7.11□□□□□ -1.27
CLIP1-205ENST00000514271 TMUB1Q9BVT8 246 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 CPEB1Q9BZB8 566 aaKnown RBP7.11□□□□□ -1.27
CLIP1-205ENST00000514271 TMEM245Q9H330 911 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 POLE4Q9NR33 117 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 KCND3Q9UK17 655 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 NUDT5Q9UKK9 219 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 PCDHGB6Q9Y5F9 930 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 RPS10-NUDT3A0A1W2PQS6 291 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 LEUTXA8MZ59 168 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 DLL1O00548 723 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 PLA2G10O15496 165 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 FZD6O60353 706 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 DFNA5O60443 496 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 ZNF780AO75290 641 aaPredicted RBP7.11□□□□□ -1.27
CLIP1-205ENST00000514271 TPH1P17752 444 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 GPX2P18283 190 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 CYP2A7P20853 494 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 CSTF2P33240 577 aaKnown RBP eCLIP7.11□□□□□ -1.27
CLIP1-205ENST00000514271 MAPK9P45984 424 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 AP1S1P61966 158 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 CSNK2BP67870 215 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 PRAMEP78395 509 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 EFR3AQ14156 821 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 DGUOKQ16854 277 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 ZNF776Q68DI1 518 aaPredicted RBP7.11□□□□□ -1.27
CLIP1-205ENST00000514271 TPGS1Q6ZTW0 290 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 DGLUCYQ7Z3D6 616 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 MRGPREQ86SM8 312 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 C1orf210Q8IVY1 113 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 FAM109AQ8N4B1 249 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 WBP2Q969T9 261 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 FAM131CQ96AQ9 280 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 KIAA1143Q96AT1 154 aaPredicted RBP7.11□□□□□ -1.27
CLIP1-205ENST00000514271 SGK2Q9HBY8 427 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 ATP13A2Q9NQ11 1180 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 MRPS18AQ9NVS2 196 aaKnown RBP7.11□□□□□ -1.27
CLIP1-205ENST00000514271 NLE1Q9NVX2 485 aaPredicted RBP7.11□□□□□ -1.27
CLIP1-205ENST00000514271 FTSJ1Q9UET6 329 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 ELF5Q9UKW6 265 aaPredicted RBP7.11□□□□□ -1.27
CLIP1-205ENST00000514271 ABCG2Q9UNQ0 655 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 CSNK1G3Q9Y6M4 447 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 SHISA7A6NL88 538 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 C16orf96A6NNT2 1141 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 PRAMEF11O60813 436 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 KCNJ13O60928 360 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 TRIM3O75382 744 aaPredicted RBP7.11□□□□□ -1.27
CLIP1-205ENST00000514271 SIX3O95343 332 aaPredicted RBP7.11□□□□□ -1.27
CLIP1-205ENST00000514271 IGSF6O95976 241 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 EGFP01133 1207 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 ITGA2P17301 1181 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 MAP4P27816 1152 aaKnown RBP7.11□□□□□ -1.27
CLIP1-205ENST00000514271 CSKP41240 450 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 SERPINH1P50454 418 aaKnown RBP7.11□□□□□ -1.27
CLIP1-205ENST00000514271 KPNA2P52292 529 aaKnown RBP7.11□□□□□ -1.27
CLIP1-205ENST00000514271 CD83Q01151 205 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 DSG2Q14126 1118 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 ELAVL3Q14576 367 aaKnown RBP7.11□□□□□ -1.27
CLIP1-205ENST00000514271 GGTA1PQ4G0N0 100 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 CRTC2Q53ET0 693 aaPredicted RBP7.11□□□□□ -1.27
CLIP1-205ENST00000514271 IER5LQ5T953 404 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 ANKS6Q68DC2 871 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 ADIPOR2Q86V24 386 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 ZNF540Q8NDQ6 660 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 CD200R1Q8TD46 325 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 NETO1Q8TDF5 533 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 IGSF8Q969P0 613 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 ATXN7L3BQ96GX2 97 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 MED18Q9BUE0 208 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 GON7Q9BXV9 100 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 SIK2Q9H0K1 926 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 SYTL2Q9HCH5 934 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 NEUROD4Q9HD90 331 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 PRM3Q9NNZ6 103 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 RNF6Q9Y252 685 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 NCKAP1Q9Y2A7 1128 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 MYO7AQ13402 2215 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 FANCMQ8IYD8 2048 aa7.11□□□□□ -1.27
CLIP1-205ENST00000514271 TRBV5-4A0A0C4DH59 114 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 PSMD11O00231 422 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 QSOX1O00391 747 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 NR5A2O00482 541 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 WNT9AO14904 365 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 LILRB5O75023 590 aa7.1□□□□□ -1.27
CLIP1-205ENST00000514271 RHOBTB1O94844 696 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms