RNA–Protein interactions for RNA: ENST00000512946.5

LIMCH1-217, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-217ENST00000512946 LAMP5Q9UJQ1 280 aa10.87□□□□□ -0.67
LIMCH1-217ENST00000512946 SALL3Q9BXA9 1300 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 TOR1AO14656 332 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 PAGE1O75459 146 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 PSMD10O75832 226 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 AHCYP23526 432 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 NDUFS1P28331 727 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 PCK2Q16822 640 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 DUSP7Q16829 419 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 WSCD1Q658N2 575 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 METAP1DQ6UB28 335 aaPredicted RBP10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 IQCHQ86VS3 1027 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 GALNT13Q8IUC8 556 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 RGMAQ96B86 450 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 MFSD3Q96ES6 412 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 ATG10Q9H0Y0 220 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 ADAM18Q9Y3Q7 739 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 TBC1D3BA6NDS4 549 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 HDCP19113 662 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 MMP12P39900 470 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 STT3AP46977 705 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 GAD2Q05329 585 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 GANABQ14697 944 aaKnown RBP10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 SLC36A3Q495N2 470 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 NAT16Q8N8M0 369 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 GPR151Q8TDV0 419 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 RSC1A1Q92681 617 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 ARMC5Q96C12 935 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 CMTM7Q96FZ5 175 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 ANKRD60Q9BZ19 345 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 TM6SF2Q9BZW4 377 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 TXNL4BQ9NX01 149 aaKnown RBP10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 TIMM13Q9Y5L4 95 aaPredicted RBP10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 LRRC7Q96NW7 1537 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 H0YGN5 161 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 BHLHE40O14503 412 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 OR7A17O14581 309 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 SEC14L2O76054 403 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 SLC22A5O76082 557 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 PNPP00491 289 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 HBE1P02100 147 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 PRNPP04156 253 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 BMP2P12643 396 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 PTPRAP18433 802 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 WEE1P30291 646 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 FRG2Q64ET8 278 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 GPR139Q6DWJ6 353 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 OR7D4Q8NG98 312 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 HS6ST2Q96MM7 605 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 ZNF599Q96NL3 588 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 FRG2BQ96QU4 278 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 ACO2Q99798 780 aaKnown RBP10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 BEX2Q9BXY8 128 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 BEX1Q9HBH7 125 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 FAM53CQ9NYF3 392 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 WNT9AO14904 365 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 MAFO75444 373 aaPredicted RBP10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 EBLN1P0CF75 366 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 CHRM1P11229 460 aaPredicted RBP10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 GGT1P19440 569 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 AMY2BP19961 511 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 TCEA1P23193 301 aaKnown RBP10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 ETV5P41161 510 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 ASPAP45381 313 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 TPMTP51580 245 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 TAS2R30P59541 319 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 PAN2Q504Q3 1202 aaKnown RBP10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 CYBRD1Q53TN4 286 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 MAP1SQ66K74 1059 aaPredicted RBP10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 S100A7AQ86SG5 101 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 PARGQ86W56 976 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 LAS2Q8IYD9 372 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 NAT8LQ8N9F0 302 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 PYCR2Q96C36 320 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 KCNH6Q9H252 994 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 ABCB8Q9NUT2 735 aa10.86□□□□□ -0.67
LIMCH1-217ENST00000512946 SLC15A5A6NIM6 579 aa10.85□□□□□ -0.67
LIMCH1-217ENST00000512946 FFAR2O15552 330 aa10.85□□□□□ -0.67
LIMCH1-217ENST00000512946 MFSD11O43934 449 aa10.85□□□□□ -0.67
LIMCH1-217ENST00000512946 IL1BP01584 269 aa10.85□□□□□ -0.67
LIMCH1-217ENST00000512946 EPHX2P34913 555 aa10.85□□□□□ -0.67
LIMCH1-217ENST00000512946 THBS3P49746 956 aa10.85□□□□□ -0.67
LIMCH1-217ENST00000512946 MAXP61244 160 aa10.85□□□□□ -0.67
LIMCH1-217ENST00000512946 RPP30P78346 268 aaKnown RBP10.85□□□□□ -0.67
LIMCH1-217ENST00000512946 RHBDF2Q6PJF5 856 aa10.85□□□□□ -0.67
LIMCH1-217ENST00000512946 CEACAM19Q7Z692 300 aa10.85□□□□□ -0.67
LIMCH1-217ENST00000512946 MINDY1Q8N5J2 469 aa10.85□□□□□ -0.67
LIMCH1-217ENST00000512946 ACBD7Q8N6N7 88 aa10.85□□□□□ -0.67
LIMCH1-217ENST00000512946 SLC35B2Q8TB61 432 aa10.85□□□□□ -0.67
LIMCH1-217ENST00000512946 ZDHHC7Q9NXF8 308 aa10.85□□□□□ -0.67
LIMCH1-217ENST00000512946 TMEM181Q9P2C4 612 aa10.85□□□□□ -0.67
LIMCH1-217ENST00000512946 A8MT66 165 aa10.85□□□□□ -0.67
LIMCH1-217ENST00000512946 PIAS1O75925 651 aa10.85□□□□□ -0.67
LIMCH1-217ENST00000512946 LTKP29376 864 aa10.85□□□□□ -0.67
LIMCH1-217ENST00000512946 JAM2P57087 298 aa10.85□□□□□ -0.67
LIMCH1-217ENST00000512946 ZNF33AQ06730 810 aa10.85□□□□□ -0.67
LIMCH1-217ENST00000512946 ARHGAP1Q07960 439 aa10.85□□□□□ -0.67
LIMCH1-217ENST00000512946 CHAF1BQ13112 559 aa10.85□□□□□ -0.67
LIMCH1-217ENST00000512946 ENPP2Q13822 863 aa10.85□□□□□ -0.67
LIMCH1-217ENST00000512946 MEF2DQ14814 521 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms