RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 PITHD1Q9GZP4 211 aaPredicted RBP11.76□□□□□ -0.53
VEGFA-216ENST00000512683 PPANQ9NQ55 473 aaKnown RBP11.76□□□□□ -0.53
VEGFA-216ENST00000512683 RYDENQ9NUL5 291 aaKnown RBP11.76□□□□□ -0.53
VEGFA-216ENST00000512683 PSAT1Q9Y617 370 aa11.76□□□□□ -0.53
VEGFA-216ENST00000512683 F8P00451 2351 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 A0A088AWK7 358 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 E7ESA3 106 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 B4GALT2O60909 372 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 H2AFYO75367 372 aaKnown RBP11.75□□□□□ -0.53
VEGFA-216ENST00000512683 SNRPB2P08579 225 aaKnown RBP11.75□□□□□ -0.53
VEGFA-216ENST00000512683 ZNF10P21506 573 aaPredicted RBP11.75□□□□□ -0.53
VEGFA-216ENST00000512683 RPL21P46778 160 aaKnown RBP11.75□□□□□ -0.53
VEGFA-216ENST00000512683 HNMTP50135 292 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 ARL4CP56559 192 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 STXBP1P61764 594 aaKnown RBP11.75□□□□□ -0.53
VEGFA-216ENST00000512683 CDKL1Q00532 357 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 PDAP1Q13442 181 aaKnown RBP11.75□□□□□ -0.53
VEGFA-216ENST00000512683 RCN2Q14257 317 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 TESK1Q15569 626 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 ZNF468Q5VIY5 522 aaPredicted RBP11.75□□□□□ -0.53
VEGFA-216ENST00000512683 FAM45BPQ6NSW5 357 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 ARHGAP11AQ6P4F7 1023 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 NXPE4Q6UWF7 544 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 ZNF227Q86WZ6 799 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 ANKMY2Q8IV38 441 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 CYP4X1Q8N118 509 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 B3GNT7Q8NFL0 401 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 LILRB4Q8NHJ6 448 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 FAM45AQ8TCE6 357 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 NEIL2Q969S2 332 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 OR4K3Q96R72 315 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 TRIM31Q9BZY9 425 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 TIMMDC1Q9NPL8 285 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 PLSCR2Q9NRY7 297 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 MOCS1Q9NZB8 636 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 ZFATQ9P243 1243 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 IKZF3Q9UKT9 509 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 PPT2Q9UMR5 302 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 YARS2Q9Y2Z4 477 aaKnown RBP11.75□□□□□ -0.53
VEGFA-216ENST00000512683 DYRK1BQ9Y463 629 aa11.75□□□□□ -0.53
VEGFA-216ENST00000512683 EFCAB8A8MWE9 144 aa11.74□□□□□ -0.53
VEGFA-216ENST00000512683 C19orf84I3L1E1 186 aa11.74□□□□□ -0.53
VEGFA-216ENST00000512683 TFECO14948 347 aaPredicted RBP11.74□□□□□ -0.53
VEGFA-216ENST00000512683 PEX1O43933 1283 aa11.74□□□□□ -0.53
VEGFA-216ENST00000512683 ZFAND5O76080 213 aa11.74□□□□□ -0.53
VEGFA-216ENST00000512683 SERPIND1P05546 499 aa11.74□□□□□ -0.53
VEGFA-216ENST00000512683 TFEBP19484 476 aa11.74□□□□□ -0.53
VEGFA-216ENST00000512683 HSD17B7P56937 341 aa11.74□□□□□ -0.53
VEGFA-216ENST00000512683 MRPS25P82663 173 aaKnown RBP11.74□□□□□ -0.53
VEGFA-216ENST00000512683 REEP5Q00765 189 aa11.74□□□□□ -0.53
VEGFA-216ENST00000512683 PDIA2Q13087 525 aaKnown RBP11.74□□□□□ -0.53
VEGFA-216ENST00000512683 RNFT1Q5M7Z0 435 aa11.74□□□□□ -0.53
VEGFA-216ENST00000512683 CATSPEREQ5SY80 951 aa11.74□□□□□ -0.53
VEGFA-216ENST00000512683 SBSNQ6UWP8 590 aa11.74□□□□□ -0.53
VEGFA-216ENST00000512683 ACAD11Q709F0 780 aa11.74□□□□□ -0.53
VEGFA-216ENST00000512683 SULF2Q8IWU5 870 aa11.74□□□□□ -0.53
VEGFA-216ENST00000512683 NKAPQ8N5F7 415 aaKnown RBP11.74□□□□□ -0.53
VEGFA-216ENST00000512683 TMEM156Q8N614 296 aa11.74□□□□□ -0.53
VEGFA-216ENST00000512683 CPSF7Q8N684 471 aaKnown RBP11.74□□□□□ -0.53
VEGFA-216ENST00000512683 AMER2Q8N7J2 671 aa11.74□□□□□ -0.53
VEGFA-216ENST00000512683 FBXO36Q8NEA4 188 aa11.74□□□□□ -0.53
VEGFA-216ENST00000512683 PYCR2Q96C36 320 aa11.74□□□□□ -0.53
VEGFA-216ENST00000512683 SDCCAG3Q96C92 435 aa11.74□□□□□ -0.53
VEGFA-216ENST00000512683 KRT12Q99456 494 aa11.74□□□□□ -0.53
VEGFA-216ENST00000512683 CCDC77Q9BR77 488 aa11.74□□□□□ -0.53
VEGFA-216ENST00000512683 MCMBPQ9BTE3 642 aa11.74□□□□□ -0.53
VEGFA-216ENST00000512683 TSPAN10Q9H1Z9 355 aaPredicted RBP11.74□□□□□ -0.53
VEGFA-216ENST00000512683 TP63Q9H3D4 680 aaPredicted RBP11.74□□□□□ -0.53
VEGFA-216ENST00000512683 NT5DC2Q9H857 520 aa11.74□□□□□ -0.53
VEGFA-216ENST00000512683 RNF14Q9UBS8 474 aa11.74□□□□□ -0.53
VEGFA-216ENST00000512683 PDZD2O15018 2839 aa11.74□□□□□ -0.53
VEGFA-216ENST00000512683 C2CD3Q4AC94 2353 aa11.74□□□□□ -0.53
VEGFA-216ENST00000512683 ZNF860A6NHJ4 632 aa11.73□□□□□ -0.53
VEGFA-216ENST00000512683 ZNF888P0CJ79 500 aaPredicted RBP11.73□□□□□ -0.53
VEGFA-216ENST00000512683 IGFBP2P18065 325 aa11.73□□□□□ -0.53
VEGFA-216ENST00000512683 GNAZP19086 355 aa11.73□□□□□ -0.53
VEGFA-216ENST00000512683 CHRNB4P30926 498 aa11.73□□□□□ -0.53
VEGFA-216ENST00000512683 PAFAH1B1P43034 410 aa11.73□□□□□ -0.53
VEGFA-216ENST00000512683 MEOX1P50221 254 aa11.73□□□□□ -0.53
VEGFA-216ENST00000512683 GPR143P51810 404 aa11.73□□□□□ -0.53
VEGFA-216ENST00000512683 BTG2P78543 158 aa11.73□□□□□ -0.53
VEGFA-216ENST00000512683 TLE4Q04727 773 aa11.73□□□□□ -0.53
VEGFA-216ENST00000512683 MGAT5Q09328 741 aa11.73□□□□□ -0.53
VEGFA-216ENST00000512683 PPP1R3AQ16821 1122 aa11.73□□□□□ -0.53
VEGFA-216ENST00000512683 FGD2Q7Z6J4 655 aa11.73□□□□□ -0.53
VEGFA-216ENST00000512683 THOC6Q86W42 341 aaKnown RBP11.73□□□□□ -0.53
VEGFA-216ENST00000512683 ZC3HC1Q86WB0 502 aaKnown RBP11.73□□□□□ -0.53
VEGFA-216ENST00000512683 ZNF595Q8IYB9 648 aa11.73□□□□□ -0.53
VEGFA-216ENST00000512683 TMEM132CQ8N3T6 1108 aa11.73□□□□□ -0.53
VEGFA-216ENST00000512683 KIF2BQ8N4N8 673 aa11.73□□□□□ -0.53
VEGFA-216ENST00000512683 APCDD1LQ8NCL9 501 aa11.73□□□□□ -0.53
VEGFA-216ENST00000512683 CREB3L4Q8TEY5 395 aa11.73□□□□□ -0.53
VEGFA-216ENST00000512683 RND1Q92730 232 aa11.73□□□□□ -0.53
VEGFA-216ENST00000512683 VMP1Q96GC9 406 aa11.73□□□□□ -0.53
VEGFA-216ENST00000512683 FAR2Q96K12 515 aa11.73□□□□□ -0.53
VEGFA-216ENST00000512683 MRPS33Q9Y291 106 aaKnown RBP11.73□□□□□ -0.53
VEGFA-216ENST00000512683 SNX24Q9Y343 169 aa11.73□□□□□ -0.53
VEGFA-216ENST00000512683 FBN2P35556 2912 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 A0A1B0GTH9 108 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 OR14I1A6ND48 311 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms