RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 EEF1A2Q05639 463 aaKnown RBP6.3□□□□□ -1.4
COPS4-209ENST00000511653 MGAT5Q09328 741 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 GRM7Q14831 915 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 DNAJC21Q5F1R6 531 aaKnown RBP6.3□□□□□ -1.4
COPS4-209ENST00000511653 VWA2Q5GFL6 755 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 IRAK1BP1Q5VVH5 260 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 TRMT10BQ6PF06 316 aaKnown RBP6.3□□□□□ -1.4
COPS4-209ENST00000511653 NLRP9Q7RTR0 991 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 LDB1Q86U70 411 aaPredicted RBP6.3□□□□□ -1.4
COPS4-209ENST00000511653 DCUN1D3Q8IWE4 304 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 OR4N4Q8N0Y3 316 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 KRT222Q8N1A0 295 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 TC2NQ8N9U0 490 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 GLB1L3Q8NCI6 653 aaPredicted RBP6.3□□□□□ -1.4
COPS4-209ENST00000511653 PIK3C3Q8NEB9 887 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 OR52K1Q8NGK4 314 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 OR1N1Q8NGS0 311 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 OR2L8Q8NGY9 312 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 PPP1R14CQ8TAE6 165 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 STT3BQ8TCJ2 826 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 DENND1AQ8TEH3 1009 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 NR4A3Q92570 626 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 HDAC10Q969S8 669 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 FERMT1Q9BQL6 677 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 LRRC40Q9H9A6 602 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.3□□□□□ -1.4
COPS4-209ENST00000511653 PTGFRNQ9P2B2 879 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 C3orf18Q9UK00 162 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 NXT1Q9UKK6 140 aaKnown RBP6.3□□□□□ -1.4
COPS4-209ENST00000511653 R3HDM2Q9Y2K5 976 aaKnown RBP6.3□□□□□ -1.4
COPS4-209ENST00000511653 PCDHA13Q9Y5I0 950 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 NFS1Q9Y697 457 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 DUSP10Q9Y6W6 482 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 JMJD1CQ15652 2540 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 ABCA2Q9BZC7 2435 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 A0A0G2JNJ9 132 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 A0A0J9YVX5 310 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 A0A1W2PPV9 198 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 TCRBV7S2A1N4TA0A589 114 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 AKR1B15C9JRZ8 316 aaPredicted RBP6.3□□□□□ -1.4
COPS4-209ENST00000511653 QSOX1O00391 747 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 MAP2K7O14733 419 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 TPM1P09493 284 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 PRR35P0CG20 571 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 MST1P26927 711 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 TNFSF10P50591 281 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 PMP22Q01453 160 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 TOP3AQ13472 1001 aaPredicted RBP6.3□□□□□ -1.4
COPS4-209ENST00000511653 PARP6Q2NL67 630 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 TCTE1Q5JU00 501 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 WASHC2DQ5SRD0 308 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 ATG9BQ674R7 924 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 RPUSD3Q6P087 351 aaKnown RBP6.3□□□□□ -1.4
COPS4-209ENST00000511653 AFTPHQ6ULP2 937 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 SYDE1Q6ZW31 735 aaPredicted RBP6.3□□□□□ -1.4
COPS4-209ENST00000511653 CNGA4Q8IV77 575 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 TTC29Q8NA56 475 aaPredicted RBP6.3□□□□□ -1.4
COPS4-209ENST00000511653 PPP1R35Q8TAP8 253 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 RELTQ969Z4 430 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 MOCOSQ96EN8 888 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 SIGLEC10Q96LC7 697 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 LURAP1Q96LR2 239 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 PPP1R2P1Q96PQ5 205 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 TMEM121Q9BTD3 319 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 MARCH4Q9P2E8 410 aaPredicted RBP6.3□□□□□ -1.4
COPS4-209ENST00000511653 Q9UFV3 132 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 SH3BGRL2Q9UJC5 107 aa6.3□□□□□ -1.4
COPS4-209ENST00000511653 MRPS2Q9Y399 296 aaKnown RBP6.3□□□□□ -1.4
COPS4-209ENST00000511653 ZANQ9Y493 2812 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 HCFC1P51610 2035 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 IGLV3-12A0A075B6K2 115 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 TRGV8A0A0C4DH27 118 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 A0A0U1RQJ8 604 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 HYKKA2RU49 373 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 CCDC154A6NI56 674 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 IDSB3KWA1 339 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 KRT38O76015 456 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 TJP3O95049 919 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 UNC5CO95185 931 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 LY86O95711 162 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 WDPCPO95876 746 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 EIF2S1P05198 315 aaKnown RBP6.29□□□□□ -1.4
COPS4-209ENST00000511653 PIM1P11309 404 aaPredicted RBP6.29□□□□□ -1.4
COPS4-209ENST00000511653 PLOD1Q02809 727 aaPredicted RBP6.29□□□□□ -1.4
COPS4-209ENST00000511653 MALLQ13021 153 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 ART3Q13508 389 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 CDSNQ15517 529 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 HKDC1Q2TB90 917 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 GFOD2Q3B7J2 385 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 FAAH2Q6GMR7 532 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 GFRALQ6UXV0 394 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 UNC5DQ6UXZ4 953 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 RNF44Q7L0R7 432 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 CXXC5Q7LFL8 322 aaKnown RBP6.29□□□□□ -1.4
COPS4-209ENST00000511653 GDF7Q7Z4P5 450 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 MRGPRGQ86SM5 289 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 PRUNE1Q86TP1 453 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 MIER2Q8N344 545 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 PRR18Q8N4B5 295 aa6.29□□□□□ -1.4
COPS4-209ENST00000511653 LRRC57Q8N9N7 239 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms